KEGG   Riemerella columbina: NYR17_05780
Entry
NYR17_05780       CDS       T09247                                 
Name
(GenBank) DNA gyrase/topoisomerase IV subunit A
  KO
K02621  topoisomerase IV subunit A [EC:5.6.2.2]
Organism
rcl  Riemerella columbina
Brite
KEGG Orthology (KO) [BR:rcl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rcl03032]
    NYR17_05780
   03036 Chromosome and associated proteins [BR:rcl03036]
    NYR17_05780
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rcl02048]
    NYR17_05780
Enzymes [BR:rcl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     NYR17_05780
DNA replication proteins [BR:rcl03032]
 Prokaryotic type
  DNA Topoisomerases
   NYR17_05780
Chromosome and associated proteins [BR:rcl03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    NYR17_05780
Prokaryotic defense system [BR:rcl02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    NYR17_05780
SSDB
Motif
Pfam: DNA_topoisoIV RTX_C
Other DBs
NCBI-ProteinID: WKS94453
LinkDB
Position
1211887..1214451
AA seq 854 aa
MIEEQLPPEGESLKKISGLYKDWFLDYASYVILDRAIPSIFDGFKPVQRRIMHSMRELED
GRYNKVANIVGNTMKYHPHGDASITDAMVQIGQKELLIDTQGNWGNVYTGDSAAAARYIE
ARLTPFALEVVFNPKTTHWIKSYDGRNNEPIDLPVKFPLLLAQGVEGIGVGLSTKVMPHN
FNELIDASIAYLKGKKFQIFPDFITGGMLDVTNYNDGERGGRLRARARIIQKDKHTLCIT
ELPFSKTTSDLIDSILKANDKGKIKIKKIEDNTSDEVEINIHLNNDVSPDKMIDALYAFT
DCEISISPNACVIVGDKPMFLSVSEILKQNTDHTVSLLKRELEIELGELEDKWHFASLEK
IFIENEIYQEIKGKDSKEAVYTAIDIALQPFTQNLMRAVTTDDIIRLTELPFMRISRYDR
DKALENIAALEGKMEQVKHHLAHLVDYAVDYFLNIKKKYGKGRERRTELRVFDTIDATKV
AVANEKFYVNRAEGFIGTSLKKDEYVFDCSDIDDIITFRKDGVMQVTKVEPKTFVGKDII
HVGVFKKGDKRTVYNMIYREGKTGPYYMKRFSVTAITRNTEYPLASDAKGSEVLYFSANP
NGEAEVVSVLLKPNARIRKNKIEIDFSELAIKGRNSRGNLVTKYAVKKVDLKEEGVSTLA
PRKIWFDETIRRLNADARGTLLGSFRGDDKILTINTKGEARLMTFDLLNRFDDEYLVLEK
WRPEQPISCIYYDGEKDIYFIKRFLLDHHTNPQYFMPSEHPKSFIEFVGTRDGATAEIIF
AKKDKAPEVVDIDDFIAVKGIKAMGNQFVKEKVKSINIQLPEPVEEEEEEEPEHTTPNAP
EIPEEGIIGDLFDA
NT seq 2565 nt   +upstreamnt  +downstreamnt
atgatagaagaacaattgccaccagaaggagagagcctaaaaaaaatatcaggcttatac
aaagattggtttttagactatgcctcttatgtgattttagaccgcgccattccctctatt
tttgatggatttaaacccgtgcagcgccgtattatgcactctatgagagagttagaagat
gggcgctataacaaggtggcgaatatcgtgggaaataccatgaaataccacccgcacggc
gatgcttctatcacagatgccatggtgcagattgggcaaaaagaactccttatagacacc
caagggaattggggaaatgtctatactggcgactctgcggcggcggcaagatatatagaa
gcccgcctaacgcccttcgcgttggaggtcgtgttcaaccctaaaaccacccattggatt
aaatcttatgacggcagaaataacgagcccatagatctccctgtaaaattcccgttgctt
ttggcacaaggcgtggaagggattggcgtggggctttccaccaaggtgatgccgcacaac
tttaatgagttgatagacgcttccatagcttacctcaaagggaagaaatttcagattttc
ccagatttcattactgggggaatgttagatgtaaccaactataacgatggcgaaagaggc
ggcaggctcagggcacgcgcacggattatccaaaaggacaaacacacgctttgcattaca
gaattgccattctcaaagaccaccagtgacttgattgacagtatcttaaaggcaaacgac
aaagggaaaatcaaaattaaaaagatagaagacaacacttctgacgaggtggaaatcaac
atccatctcaacaatgatgtctcgccagataagatgatagatgccctctacgcctttacg
gattgtgaaatttctatctcgcctaacgcctgtgtgattgtgggcgataaacccatgttc
ctcagcgtttccgaaattctaaaacagaacacagaccacaccgtttcgctgctgaagagg
gagttggaaatagaattgggcgagttggaggacaagtggcactttgcatcgttagagaaa
atttttatagaaaacgaaatctatcaagagattaaaggcaaagactccaaagaagccgtt
tataccgccatagatattgccctccagccttttacacaaaacctgatgcgcgcggtaacc
acagatgatattatccgcctgaccgaacttccttttatgcgaatttcaaggtatgatagg
gataaagccttagaaaacatcgcagcgctggaagggaaaatggagcaagtcaagcatcat
ttggcgcatttggtggactatgccgtggattatttcctcaacattaaaaagaaatacggc
aagggcagagagcgccgcacggaacttcgggtttttgataccatagatgccactaaagtt
gccgtagccaacgagaaattttatgtcaatcgcgctgaaggcttcatcggaacttcgttg
aaaaaagatgaatatgtctttgattgctcggatattgatgatatcattaccttccgaaaa
gatggtgtgatgcaggtgaccaaagtagagcctaaaacctttgtgggcaaagatattatc
catgtaggtgtgttcaaaaaaggcgacaaacgcacggtttataatatgatctaccgcgag
ggcaaaacgggaccttattatatgaagcgcttttccgtaaccgccatcactagaaataca
gagtacccgctggcatcagatgcaaagggctccgaggtgctttatttctccgccaatccc
aacggcgaggcagaggtggtcagcgttttactaaagcctaacgcacggattagaaagaac
aaaatagagatagatttctcagaattagccatcaaagggcgaaattcacgagggaatttg
gtgaccaaatatgcggttaaaaaagtggatttaaaggaagaaggcgtttccaccttagca
ccacgcaaaatatggtttgatgaaaccattcgcaggctgaatgccgatgcccgaggcacg
ctcttaggtagttttagaggagatgataaaatcctgacaatcaataccaaaggcgaggca
aggctgatgacttttgaccttctcaaccgttttgatgatgagtatttggttttagaaaaa
tggcgaccagagcaaccgatttcttgcatttattacgatggcgagaaggatatttatttc
atcaagcggttcttgttggatcaccataccaatccgcaatattttatgccgagcgagcac
cccaaatcgtttatagagtttgtgggcacccgagatggcgccaccgcagaaatcatcttt
gcgaagaaagacaaagcaccagaagtggttgatattgatgattttatcgcggtgaaaggc
atcaaagcgatgggcaatcagtttgtaaaagaaaaagtaaaaagcatcaacatccagctg
ccagaacctgtggaagaagaggaggaggaagaaccagaacacaccacccccaacgcccca
gaaatcccagaagaaggcattatcggagatttgtttgatgcataa

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