Riemerella columbina: NYR17_06395
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Entry
NYR17_06395 CDS
T09247
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
rcl
Riemerella columbina
Pathway
rcl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NYR17_06395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcl03400
]
NYR17_06395
DNA repair and recombination proteins [BR:
rcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NYR17_06395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MSSS
AAA_22
DUF4404
Motif
Other DBs
NCBI-ProteinID:
WKS94562
LinkDB
All DBs
Position
complement(1341062..1343209)
Genome browser
AA seq
715 aa
AA seq
DB search
MQITKDSLEELEFPQLLAEISPYAYSTKIAEHIALIKPLEKEEAELSLKKVSEFLSSFES
ENAIPFNEYEDIELELKLMKIENYRLDSASFIKIKQITEQIGRLQKFFPQYSDLFPELLS
AVQALTFHKEIIEKIDAVFNRFGEVKSDASAVLKELRAEIQKSRRAIDENFNRALSQYAQ
SDFLDEIRETIIDDQRVLAVKSGFKKRVQGRTLGVSKTGSITYIQPETVVKHYFKLRENT
EEEKKEIDRILRKLTLEIAEYQPHLKTYQTYIFDLDLTRAKAKFAEKIHGVLPKINPHQT
LRLREAYHPLLWLQNTAENKKIFPQNLTLTEHNRIICISGPNAGGKSITLKTVGLLQVML
QSGILVPVHPKSEMFFFERIMTDIGDNQSIENHLSTYSSRLKKMSHIIKEANAQTLLLID
EFGTGSDPELGGALAESFLEFFYDKKSFAIITTHYTNIKLVVEQLPSATNAAMLFDENSL
EPLYKLEVGQAGSSFTFEVAEKNKIPRFIIKNARQKVEKDVVNLDKTIVKLQQEKFEVEK
LKSNLTEQRESVEDKRENLQKLNEQLEQKLFNFQKLYEEEHRKLQFGNKIEHFINSYVNG
RSRKDLVREFVKILEQEKYRKLGADKDESKRLQVIRRKVNQQLKKQEVKEKIAETNEKLE
EKRQKERAVWLKEGQRVRIMGSTSVGTIESISKNKVTVNYGLFKTQISPDELERV
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaattaccaaagacagtttagaagaattagaatttccgcagttgttagcggagatt
tcgccttatgcctactccacgaaaatagcggagcacatagccctcatcaaacctttagaa
aaagaagaagccgaactttcattaaaaaaagtctccgaatttctttcaagttttgagagt
gaaaacgccatccccttcaacgagtatgaggatatagagctggaactcaaactgatgaaa
attgaaaactaccgtttagacagtgcttctttcatcaaaataaagcaaataacggagcaa
atagggcgcttgcagaagtttttcccacaatattcggacttgtttccagagctgttatcg
gcggtacaagccttaacttttcataaagaaattatagaaaaaatagatgccgttttcaat
cggtttggggaggtcaagtctgatgcttcggcagtgttaaaagaacttcgtgccgaaatc
caaaaatcacggagagccatagatgagaatttcaaccgtgctcttagccaatatgcccag
agcgattttttagatgaaattagggaaacgattattgatgaccaaagggttttagcggta
aaatctggctttaaaaagcgtgtgcaggggcgtactttgggcgtttctaaaacaggttct
atcacttatatacaacccgaaacggtggtaaagcactattttaaactcagagaaaatacc
gaggaagagaagaaagaaatagaccgtattttaagaaaactcactttggaaattgctgaa
tatcagccccatttaaaaacctaccaaacttatatttttgatttagacctcacgcgtgcc
aaagccaaatttgcggagaaaatccacggtgtgttgccaaaaatcaatccgcaccaaacg
ctgcgccttagggaggcttatcaccctttgctgtggctacaaaatacggcagaaaataag
aagattttccctcaaaatctgacccttacggagcacaatcggattatttgtatttcgggg
cccaatgcgggtgggaaatccattacgttaaaaaccgtggggctactgcaagtgatgctt
caatcagggattttagtgcctgtgcatcccaagtcggagatgtttttctttgaacgcata
atgacggatattggtgataatcaatctattgaaaatcacctttctacctactcttctcgc
ttgaaaaaaatgtcgcacatcattaaagaagccaatgcacaaactttacttttaatcgat
gaatttgggacaggttcagatccagaattgggcggtgctttggcggagagctttttggag
tttttttatgataaaaaatcgtttgccattatcaccacgcattataccaatatcaaactg
gtggtggagcaactgccgagtgccaccaatgccgctatgctttttgatgaaaattcctta
gagccgttgtataaattagaagtggggcaggcggggagttcgtttacttttgaggtggcg
gagaagaataaaatccctcggtttatcattaaaaatgcaaggcaaaaggtagaaaaagat
gtggtgaatttggataaaacgatagtgaaacttcagcaagaaaaatttgaagtggaaaaa
ttaaaatccaacctcacagagcaacgagaatcggtggaggacaagcgcgaaaacctccaa
aaattgaatgaacaattggaacaaaaactatttaatttccagaaattatacgaggaagag
caccgcaaattgcagtttgggaataagatagagcatttcatcaactcctatgtgaatggg
cgttcaagaaaggatttggtgcgagagtttgtgaaaattttagagcaagaaaagtacaga
aaattaggtgccgataaagatgaatccaagcgcctgcaagtgattcgtagaaaagtcaat
cagcaacttaaaaagcaagaagtcaaggaaaaaatagccgaaaccaacgaaaaattagag
gaaaaaagacaaaaagaaagagccgtttggcttaaagaaggtcagcgcgtgcggattatg
ggcagcaccagcgtgggtaccatagagtctatttccaaaaataaggtaacggtgaattat
ggtttgttcaaaactcaaatttcccctgatgaattagagcgtgtataa
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