Riemerella columbina: NYR17_06470
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Entry
NYR17_06470 CDS
T09247
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
rcl
Riemerella columbina
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcl03009
]
NYR17_06470
Enzymes [BR:
rcl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
NYR17_06470
Ribosome biogenesis [BR:
rcl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NYR17_06470
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
HSD_C
DUF6831
Scabin-like
Motif
Other DBs
NCBI-ProteinID:
WKS94575
LinkDB
All DBs
Position
complement(1359687..1360628)
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AA seq
313 aa
AA seq
DB search
MSRERNNFSSGRGKSGSNRNRTGNSRGSKLNGKNFDARDKYVKGDRREGGRGSQASAEDR
ARNFVQKRRINKLVQQPKETIRLNKYIANSGICSRREADELIQQGLVEVNGKVVTEMGYQ
VQKTDKVSFDGQNLTPEKPVYVLLNKPKGYISTTKDEKARKTVMELTANASPYRIFPVGR
LDRQTTGVILLTNDGHLTKKLTHPSFNIKKIYHVTLDRKLSREDMNTIAEGIRLEEGVAE
VDHISYIEGKPKNEIGIEIHIGWNRVIRRIFQRLGYEVEALDRVMFAGLTKKNIKRGHWR
ILTDLEVNNLKML
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagcagagaacgcaacaatttttcatcaggaagaggtaaatctgggtctaatagaaat
agaaccggaaattctcgtggctcaaaattgaatggtaaaaactttgacgctcgtgataag
tatgtcaaaggagaccgcagagaaggggggcgcggtagccaagcttcggcggaagataga
gcaagaaattttgtgcagaagagaagaataaacaagttggtacagcagcctaaagaaact
attaggctaaataaatatatcgccaattctggaatatgcagcaggagagaggccgatgag
ttgatacaacaaggcttggtagaagtgaatggcaaagtggtgaccgagatgggctaccaa
gtgcaaaaaacggataaagtcagctttgatgggcaaaatctaacgcctgaaaagcccgtg
tatgtgctccttaacaagccgaaaggctacatttctacaacgaaagatgagaaagccaga
aaaacggtgatggagctgacagccaatgcatcgccgtaccgtattttccctgtggggcgc
ttagaccgacagactacgggcgttattttactgactaatgatgggcatttaaccaaaaaa
ttaacgcatccgtcttttaatattaagaaaatttaccatgtcactttggacagaaaatta
tctcgcgaggatatgaacaccattgcagagggcattcgtttggaggaaggcgtggcagag
gtagaccacatttcttatattgaaggtaagccgaaaaatgaaatcggtattgagattcat
attggatggaatagggtgattcgccgtattttccaaagattgggctacgaggtagaagcg
ctggatagagtgatgtttgcagggctgaccaagaagaatatcaagcgtggtcattggcgc
atcttaaccgatttagaggtgaataacctcaaaatgttataa
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