Riemerella columbina: NYR17_06685
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Entry
NYR17_06685 CDS
T09247
Name
(GenBank) D-2-hydroxyacid dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
rcl
Riemerella columbina
Pathway
rcl00260
Glycine, serine and threonine metabolism
rcl00270
Cysteine and methionine metabolism
rcl00680
Methane metabolism
rcl01100
Metabolic pathways
rcl01110
Biosynthesis of secondary metabolites
rcl01120
Microbial metabolism in diverse environments
rcl01200
Carbon metabolism
rcl01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
NYR17_06685
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NYR17_06685
00270 Cysteine and methionine metabolism
NYR17_06685
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcl04147
]
NYR17_06685
Enzymes [BR:
rcl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
NYR17_06685
1.1.1.399 2-oxoglutarate reductase
NYR17_06685
Exosome [BR:
rcl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
NYR17_06685
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
Shikimate_DH
AlaDh_PNT_C
RS_preATP-grasp-like
Gp_dh_N
GFO_IDH_MocA
DUF5615
Motif
Other DBs
NCBI-ProteinID:
WKS94617
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All DBs
Position
1405610..1406563
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AA seq
317 aa
AA seq
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MKILANDGLSQKGVKMLTQAGIEVLEHRVAQEQLSHFINDNQIDGLLVRSTTKVPKELID
ACPSLRLIGRGGVGTDNIDVAYAESKGIKVINTPAASAQSVAELVFAHFFTLARFLHEAN
RMMPLEGETKFKALKKSYAQAVELSGKTLGIIGFGRIGKEVAKIGIALGMKPLVVTRTAR
KENLSWSFFDGSTVHFEIETTTDLHEVLSQSDFLTINTPKTEHYLIDTPEYEAMKSGIFI
VNAARGGVLNEQALLDFIESGKIAGAALDVFETEPEPSLAVLMNPALSLSPHLGGSTVEA
QDRIGTELAQQIIKLRS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattagcgaacgatgggctttcccaaaaaggagtaaaaatgctgacccaagcg
gggatagaagttttggaacaccgcgtagcccaagaacagttgagccatttcattaacgat
aaccagattgatggacttttagtgaggagtaccaccaaagtccctaaagaattgatagac
gcttgcccttcgcttcggttgatagggcgcggcggcgtaggcacagacaacattgatgtg
gcttatgcggaaagcaaaggcatcaaggttattaacacgcccgcagcctctgcccaatct
gtggcagagttggtttttgcgcactttttcaccttagcgaggttccttcacgaagccaat
agaatgatgcccttagaaggcgaaaccaaattcaaagcgcttaaaaaatcttatgcgcaa
gccgtagagctctcagggaaaaccttaggcattatcggctttggtagaataggaaaggaa
gttgccaaaataggcatcgctttggggatgaagcccttggtggttacacgcacagcaaga
aaagaaaacctcagctggtcgttctttgatggcagtacggttcattttgaaatagaaacc
accactgacctccacgaggtgttatcacaatcggattttttgaccatcaacacgcctaaa
accgagcattacctcatcgatacacctgaatatgaagctatgaagtctggaatattcatc
gtgaatgctgctcgtggtggcgttcttaacgagcaagcccttttagactttatagaatct
ggaaaaattgcaggcgcggcattagatgtttttgaaacagagccagagccttcattagcc
gttctgatgaaccctgccctttcattatctccacacttaggtggcagcaccgtggaagcc
caagatagaattggtacagaattagcacagcaaattataaaattaagatcataa
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