Riemerella columbina: NYR17_06790
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Entry
NYR17_06790 CDS
T09247
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
rcl
Riemerella columbina
Pathway
rcl00020
Citrate cycle (TCA cycle)
rcl00640
Propanoate metabolism
rcl00720
Other carbon fixation pathways
rcl01100
Metabolic pathways
rcl01110
Biosynthesis of secondary metabolites
rcl01120
Microbial metabolism in diverse environments
rcl01200
Carbon metabolism
Module
rcl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rcl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NYR17_06790 (sucD)
00640 Propanoate metabolism
NYR17_06790 (sucD)
00660 C5-Branched dibasic acid metabolism
NYR17_06790 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
NYR17_06790 (sucD)
Enzymes [BR:
rcl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
NYR17_06790 (sucD)
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GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
KARI_N
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
WKS94637
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Position
complement(1427016..1427888)
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AA seq
290 aa
AA seq
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MSVLVNKDSKVIVQGFTGNEGTFHAGQMIDYGTNVVGGVTPGKGGTEHLGKPVFNSVAEA
VEKAGANVSIIFVPPAFAADAIMEAADAGIKVIVCITEGIPVADMTKVKEYIADRDCRLI
GPNCPGIITSDEAKIGIMPGFVFKKGKVGIVSKSGTLTYEAADQVVRAGYGISTAIGIGG
DPIIGTTTKEALEMFINDPETEAVVMIGEIGGNLEAEAAKWYKASGSTKPVVGFIAGQTA
PKGRTMGHAGAIVGGAEDTAQAKMAIMRENGIHVVDSPADIGKTVAKVLA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtattagttaacaaagattctaaagtaatcgttcaagggtttacaggtaatgaa
ggaaccttccacgcaggtcaaatgatagactatggtaccaatgtagtaggtggcgtaaca
ccaggaaaaggagggacagagcatttaggaaaacccgtatttaattctgtagcagaggct
gtagaaaaagcaggtgctaatgtgagtattatattcgtaccgccagcatttgcagcagat
gctattatggaagctgcagatgcaggaatcaaagttattgtttgtattacagaaggtatt
cctgttgctgatatgaccaaggttaaagaatatattgcagatagagattgccgtttaatc
ggtcctaactgcccaggtattatcacttctgatgaagctaaaatcgggattatgccaggt
ttcgttttcaaaaaaggtaaagtggggatcgtttcaaagtctggaacgctaacttacgaa
gctgcagaccaagtggtgagagcaggttacggtatttctacggctatcggtatcggtgga
gacccaattattggaacaacgactaaagaggcgttagaaatgttcatcaacgacccagaa
actgaggctgtagtgatgattggagagataggtggtaacttagaggcagaagcagctaaa
tggtataaagccagcggctctactaagccagtggtaggttttatcgcaggtcaaacagca
ccaaaaggaagaactatggggcatgctggagccattgtaggcggcgctgaagatacagca
caagccaaaatggcaattatgagagaaaacggcatccatgtggtggattctcctgcagat
ataggtaaaactgtagctaaggtattagcataa
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