Riemerella columbina: NYR17_06815
Help
Entry
NYR17_06815 CDS
T09247
Name
(GenBank) bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase
KO
K16363
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:
3.5.1.108
4.2.1.59
]
Organism
rcl
Riemerella columbina
Pathway
rcl00061
Fatty acid biosynthesis
rcl00540
Lipopolysaccharide biosynthesis
rcl01100
Metabolic pathways
rcl01212
Fatty acid metabolism
Module
rcl_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NYR17_06815
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NYR17_06815
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rcl01005
]
NYR17_06815
01004 Lipid biosynthesis proteins [BR:
rcl01004
]
NYR17_06815
Enzymes [BR:
rcl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
NYR17_06815
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.59 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
NYR17_06815
Lipopolysaccharide biosynthesis proteins [BR:
rcl01005
]
Lipid A
NYR17_06815
Lipid biosynthesis proteins [BR:
rcl01004
]
Fatty acid synthase
Component type
NYR17_06815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
FabA
MaoC_dehydratas
Motif
Other DBs
NCBI-ProteinID:
WKS94642
LinkDB
All DBs
Position
complement(1430801..1432195)
Genome browser
AA seq
464 aa
AA seq
DB search
MSDKQKTLKEAVSISGIGLHTGKEVNLTIKPAKENTGFVFVRTDLEGHPQVEADVNYVTT
TERGTTLEKLGVKIHTTEHLLAALVGLDIDNAILEMDNAEPPILDGSSKFFVEAIEKVGI
EEQDQPREYLVVKEVMSYTDPNTGSELTIIPSDNYEITTMVDFGTKVLGTQNATLKDISE
FKNEFASARTFSFLHEIEMLLGHGLIKGGDISNAIVYVDKELTPETTEKLKKVFGKEEIS
IRPNGILDNLTLNYPNEAARHKLLDVIGDLALVGVKIKGKVIANKPGHYVNTQFAKKLNR
QWKLHKKKNVPDFDLTKEPVYDINGIMSLLPHRPPFLLIDKVLELSDTHVVGLKNVSMNE
PFFVGHFPKEPVMPGVLQIEAMAQTGGILVLANVQDPENYSTYFVKIDKVKFKKKVVPGD
TLIFKIELIEPIRRGIVHMQGYGYVGDSVVVEAELMAQVAKTKN
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataagcaaaaaactttaaaagaagcggtatccatttctggtattgggcttcac
acaggaaaggaggttaatttaaccattaaaccagccaaagaaaatacagggtttgttttt
gtaagaacagatttagaaggacacccccaagtggaagccgatgttaattatgttaccacc
acagaacgaggtaccactttagaaaaattaggcgttaagatccataccacggagcacctt
ttggcggctttagtaggcttggatattgataatgctattttggaaatggacaacgcagaa
ccgcctattttagatggttcttctaagttctttgtagaagcgatagaaaaagttggcata
gaagaacaagaccaaccgagagaatatttagtggttaaagaagtgatgagttacacggat
cccaatacgggttcggagctgaccattatcccttccgacaattatgaaatcaccacaatg
gtggatttcggaaccaaggttttaggcacgcagaatgccacgctcaaagatatttctgag
tttaaaaatgaatttgccagtgccagaactttcagtttcctccacgagatagaaatgctt
ttgggccacggtttaatcaagggtggtgatatcagcaacgctattgtttatgtggataaa
gagctcacgccagagactacagaaaaactcaaaaaagttttcggtaaagaggaaatctct
attcgcccgaatggtattttagacaatttgactttaaattatcctaacgaagcggcacgg
cataaacttttagatgtcattggcgacctagcgttggttggagttaaaataaaaggtaaa
gtaatagccaataaaccagggcattatgtaaatacgcaattcgcaaaaaaactcaaccgc
cagtggaaacttcataagaaaaaaaatgttccagactttgatttaacgaaggaaccagtt
tatgatatcaacggtattatgagtttgttgccacatcgtccgcctttcttattgatagat
aaggtgttagaactttcggatacacatgtggtagggcttaaaaatgtatcgatgaacgag
cctttctttgtggggcatttccctaaagaacccgtgatgccaggtgtattacagatagaa
gctatggcgcaaacaggcggaattttggtgttagccaatgtgcaagatccagaaaattat
tctacttatttcgtgaagatcgacaaagtgaaattcaagaaaaaagtagtaccaggggat
accttaatattcaaaatagaattgatagagcctatcagaagagggattgtccatatgcaa
ggctatggttatgtgggagatagcgtagtggtagaggcagagctgatggctcaagtagcg
aaaactaaaaactaa
DBGET
integrated database retrieval system
