Riemerella columbina: NYR17_06980
Help
Entry
NYR17_06980 CDS
T09247
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
rcl
Riemerella columbina
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcl02000
]
NYR17_06980
Transporters [BR:
rcl02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NYR17_06980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
Motif
Other DBs
NCBI-ProteinID:
WKS94671
LinkDB
All DBs
Position
complement(1464047..1465360)
Genome browser
AA seq
437 aa
AA seq
DB search
MKSRIIKPLLLIAALSAGVTSCERYLDITPTGRVVPQTEEDFRALLTRAYQQYPQHKALL
NLKTDEVKAGNSSESLKAIYTWSEANATSESINMPYASFYEVIFNTNYIIKNLKVYNAKN
AVTDQILGEALALRAYTYFQLLGIYAPAVQPQNGAELAVPLVTDINLEGSFPRATLAEVY
QQIWADLNQAEGLLQQEKYEAGYNYRFTTTALHAFKARLHQHRQEWAQALAEAEKVLAVN
AELEDFNQFTVLPSHYQSKESIMNLDLAVNATTSRFSRVSDEHLALFDQNNDLRFAHYFK
KNGNAWQTTKYKDNDYKCSFRVADLLLIKAEAEAHLGQEAASKSTLIQLAEKRYNAIGLQ
AFKAKINALSGADYLQELWNERARELSFEGLRWGDLRRTTQPEITHIFDGQTYKLSAQDA
RYTTPFPKEARLKNPQL
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaagaataataaaacccctattactcattgccgcactttccgcaggagtgacc
tcttgcgagcgctatttagacatcacgccaacgggcagagtggtgccacagaccgaggaa
gattttagagccttgctcacccgtgcctaccaacaatatccgcagcacaaagccttgctc
aacttaaaaaccgatgaggtgaaagcgggcaattcttcggaaagcctaaaagccatctac
acttggagcgaggctaatgcgacttccgagtccatcaatatgccctatgcctctttctac
gaggtgattttcaacaccaactacatcatcaaaaacttaaaggtgtataatgctaaaaac
gccgtaacagaccagattttaggcgaagcattggcgctaagagcctacacttattttcaa
cttttgggaatttatgccccagcggttcagcctcaaaatggtgccgaattagccgtacca
ttggtaacggatatcaatctggaaggcagtttcccaagagcgactttggcggaagtctac
cagcagatatgggcggacctcaaccaagccgaagggctattgcaacaagaaaagtatgag
gcaggctacaattaccgctttaccaccacggcgctgcacgcctttaaagcccgcctacac
cagcatcggcaagagtgggcgcaagcgctggcagaggcagagaaagtcttggcggttaat
gccgagttggaggacttcaaccagttcacagttttgcccagccattaccaatctaaggaa
tctattatgaatttagatttggcggtcaatgccaccacctctcgcttttcaagggtgagt
gatgaacacttggcgctctttgaccaaaataacgatttgcgctttgcacactattttaag
aaaaacggcaatgcttggcaaaccactaaatataaagacaacgactataaatgtagcttc
cgtgtggcagatctattattgataaaagccgaggcagaggcgcatttagggcaagaagcg
gcatctaaaagcacgctaatccaactggcagaaaagcggtacaacgccataggcttgcag
gcttttaaggcgaaaatcaatgcattatcgggcgcagattacctgcaagaactttggaac
gaaagggcacgcgaactttcttttgaaggtcttcgttggggcgatttaaggcgcaccacc
caacctgaaattacccatatttttgatgggcaaacctataaactttccgcccaagatgca
cgctacaccacgcctttccctaaagaagcaaggctcaaaaacccacagttgtag
DBGET
integrated database retrieval system
