Riemerella columbina: NYR17_07655
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Entry
NYR17_07655 CDS
T09247
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
rcl
Riemerella columbina
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcl03019
]
NYR17_07655
03009 Ribosome biogenesis [BR:
rcl03009
]
NYR17_07655
Messenger RNA biogenesis [BR:
rcl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NYR17_07655
Ribosome biogenesis [BR:
rcl03009
]
Prokaryotic type
rRNA processing factors
NYR17_07655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
WKS94797
LinkDB
All DBs
Position
1611241..1612800
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AA seq
519 aa
AA seq
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MKKELLISNEDGASKIALIEDGRLFELHEEEQDNTLVVGDIYLGKIKKLAPNLNAAFVNI
GYDKDAFLHYQDLGPQYLTYKKFLREVHSKRKNDSSLKNFPIEKTIDKNGMIDSVLAKDD
TVLIQITKEPISTKGARISTQISLTGRFLVLIPFDQKVSISKKIRDNAEKDRLRTLIESI
KPEGFGVIIRTVAEGKKVAELHNDMNHLVEKWETCFKNIQKNKIPSKILSEEDKASAILR
DNFNADFVSIICDDETMVQDMRNYLEVIAPERKNIVEFYDNHIPLLEYYNVEKQLKQSFG
KHVNIPSSKGAYLVIEHTEALHVIDVNSGNNISTGSHANKEHALKVNKMAATEIARQLRL
RDMGGIIVVDFIDMREANHRKELYEHLKTEMKRDKARHKILPPSKFGLIQITRQRVRPEK
VIETKEENPNKDGEILAPVVIVERMSEVIRNLLQKEKGRLYLHTHPFVEAYLTKGLMSIQ
TKWFFKYKKWVTIVPRDSFKYLEYKIYNDKKEELVSFSN
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagaactcttaatatccaatgaagatggtgcttctaaaattgcattgatagaa
gacggacgcttatttgaactacacgaggaagaacaagacaatacccttgtggtaggtgat
atctatttaggtaaaattaaaaaattagcacccaacctcaacgccgctttcgtgaatatc
ggctatgataaagatgcgtttttacattaccaagatttaggcccacagtaccttacttat
aagaaatttctcagagaagtccattctaaaagaaaaaacgactccagcttgaagaatttt
ccaatagaaaaaaccattgacaaaaatggaatgatagatagcgttttggcaaaagatgac
accgtgctcatccaaattaccaaagaacctatctccaccaaaggtgccagaatctccaca
cagatatccctcacaggcaggtttcttgtgcttattccttttgaccaaaaagtttctatc
tctaaaaaaatcagggataatgcggaaaaagaccgcctaagaaccttgatagaaagtata
aagcccgaaggctttggcgtgattatcagaacagtagcagaaggcaaaaaagttgccgaa
ctacacaatgatatgaaccatctggtagagaaatgggaaacttgtttcaaaaatattcaa
aaaaacaaaatcccctctaaaattttaagcgaggaggacaaagcgtctgccattctaaga
gataattttaatgcagattttgtaagcatcatctgtgatgatgaaaccatggtgcaagat
atgagaaactatctggaagtcattgcaccagaacgaaaaaacatagtggaattttatgat
aatcatatcccacttttagagtattacaatgtagagaaacagctcaaacagagctttggc
aagcatgtgaacatcccgagttccaaaggcgcctatctggtgatagaacacaccgaagcc
ctccatgtgattgatgtgaactccggcaacaacatctccacagggagccacgccaacaaa
gagcacgccttaaaagtcaacaaaatggcagcaacagaaatcgccagacagctgagactc
agagatatgggcggcattattgtggtggactttatcgatatgagagaagccaaccacaga
aaagaactctacgaacatctaaaaacggaaatgaagcgtgataaagcacgccataaaata
ctaccgcccagcaagtttgggcttatacaaatcacccgacagcgcgtgcgcccagaaaaa
gtgatagaaactaaggaagaaaatcctaataaagacggcgaaatcttagcaccagtcgtg
attgtagagcggatgtctgaggtgattagaaacttattacaaaaagaaaaaggacgccta
tatctgcacacccatccctttgtagaagcctacctaaccaaaggactgatgagcatacaa
accaaatggttttttaaatacaaaaaatgggtaacgatagtcccgagagactccttcaaa
tacttagaatacaaaatctataacgataagaaagaagaattggtcagtttctcaaactaa
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