Riemerella columbina: NYR17_08600
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Entry
NYR17_08600 CDS
T09247
Name
(GenBank) DeoR/GlpR family DNA-binding transcription regulator
KO
K02468
DeoR family transcriptional regulator, glucitol operon repressor
Organism
rcl
Riemerella columbina
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcl03000
]
NYR17_08600
Transcription factors [BR:
rcl03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
NYR17_08600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
RepL
GntR
FilR1_N
HTH_6
MarR_2
HTH_5
Put_DNA-bind_N
HTH_20
HTH_Mga
CggR_N
HVO_A0114
HTH_36
MarR
BRCT_3
DUF8612
WHD_GTF3C1
Sugar-bind
Fe_dep_repress
Bflower_2
HTH_PafC
Rrf2
HTH_65
HVO_A0261_N
ANT
Motif
Other DBs
NCBI-ProteinID:
WKS94973
LinkDB
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Position
1834266..1835027
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AA seq
253 aa
AA seq
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MNITKRHQYILDQLKQENHVLVSELAKALEVSEVTIRKDFKVLEKKGLLFRNHGGASLVN
PYVVDRPISHKQHLNKSEKNRIAIAATEVIEDHDVVILGSGTTVLNMVESFPKDKTVTVI
TSSLLIANMLSQYEKIAVIQIGGEVRRSSQSTVGPVAQKFMEEISANKLFLGVDGIDLDF
GISTSNTAEAHLNRMMIKNASKTYILSDHSKFGKKGLGQICSLRNIDCLITDQSPSEEIK
KTLEKLSIQLVVT
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcactaaaagacatcagtatattttagaccaactaaagcaggagaatcatgtt
ttggtttcggaattggctaaggctttagaagtttctgaagtgacgattaggaaagacttt
aaagtcttagaaaaaaaggggcttttatttagaaaccacggcggcgccagcttggtgaac
ccttatgtggtggatagacctataagccataaacaacaccttaacaaatctgaaaaaaac
agaattgccattgccgcaactgaggttatagaggatcatgatgtggtgatcttgggctcc
ggtactacggtgctgaatatggtggagagtttcccaaaagataaaaccgttacggtgatt
acctcatctctcctcattgcgaatatgctctctcagtacgaaaaaattgccgttattcaa
attggtggagaggtaaggcgctcctcccaatctaccgtgggacctgtggcacagaagttt
atggaagaaatctctgccaataagctattcttgggcgtagatggtattgatttagatttt
ggtatctccacctctaacacagcggaagctcaccttaaccggatgatgattaaaaatgcg
agcaaaacctatatcctttccgaccattctaaatttggcaaaaagggcttagggcaaatc
tgctcgctaaggaatatagactgccttattaccgaccaatcccccagcgaagaaataaaa
aaaactttggaaaaactgagtatacaattggttgtcacctag
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