Riemerella columbina: NYR17_08895
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Entry
NYR17_08895 CDS
T09247
Name
(GenBank) 2-hydroxyacid dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
rcl
Riemerella columbina
Pathway
rcl00260
Glycine, serine and threonine metabolism
rcl00270
Cysteine and methionine metabolism
rcl00680
Methane metabolism
rcl01100
Metabolic pathways
rcl01110
Biosynthesis of secondary metabolites
rcl01120
Microbial metabolism in diverse environments
rcl01200
Carbon metabolism
rcl01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
NYR17_08895
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NYR17_08895
00270 Cysteine and methionine metabolism
NYR17_08895
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcl04147
]
NYR17_08895
Enzymes [BR:
rcl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
NYR17_08895
1.1.1.399 2-oxoglutarate reductase
NYR17_08895
Exosome [BR:
rcl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
NYR17_08895
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
NAD_binding_2
KARI_N
AdoHcyase_NAD
F420_oxidored
DUF3879
3HCDH_N
UDPG_MGDP_dh_N
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
WKS95029
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All DBs
Position
complement(1888511..1889443)
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AA seq
310 aa
AA seq
DB search
MRILQLDHNHPLIQTQLTAAGMQVDEDLTSNAEAILQKIKNYDGIILRSRIPIDAHFLNQ
ASHLKFIARVGAGMENIDVQKAEALGITLINSPEGNRDAVAEQALGMLLLLMNRLIISSN
EVKRGIWKREENRGEEIKDKTVGLIGYGYMGKALARRLQGFGCRVIFHDIKPNLSDDYAT
QVSLETLQEQADIVSLHLPLAEDTLGWLDADFISKMRKPFYLINTARGKNIITADVVQAL
KQGKIKGAALDVLEYEKASFERLEHQNQDLEYLLNSEKVIVTPHIAGWTHESKIKLAQVI
VDKILAQFKA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgagaattctccaattagaccacaatcatcctttaatccaaacgcagctgaccgccgca
ggtatgcaggtagatgaagacctgacctccaatgcagaggcaattttgcagaagattaaa
aattatgatggcatcattttaagaagtagaatccccattgatgcccattttctgaaccaa
gcctcgcatttaaaatttattgcaagggtgggcgcaggtatggaaaatatagatgtccaa
aaagccgaggcgttagggataacgctcatcaactcccccgagggcaacagagatgccgtg
gcagagcaagcgctggggatgttactattgctgatgaaccgcttgattatttcctccaat
gaggtaaagcgcggcatctggaagcgagaagaaaaccgaggcgaagagatcaaggacaaa
accgtgggactcatcggctatggttatatgggtaaagctttggcaaggcggttacaaggt
tttggctgccgtgtgattttccacgatataaagcccaatctttccgatgattatgccacg
caagtcagtttagaaaccttgcaagaacaggcagatattgtgagccttcatttgcctttg
gctgaagatactttgggttggctagatgccgattttatctcaaagatgagaaagccgttt
tacctcatcaacactgcgaggggcaaaaatatcatcaccgcagatgtggtgcaagcgcta
aaacaaggcaaaataaaaggtgccgccttagatgttttggaatacgaaaaagcctctttt
gagcgtttagaacatcagaatcaagatttggaataccttctcaattccgaaaaggtgatt
gtaacgcctcatattgcagggtggacgcacgagagtaaaatcaaattagcgcaagtgata
gtagataaaattttagcacaatttaaagcttaa
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