Riemerella columbina: NYR17_09085
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Entry
NYR17_09085 CDS
T09247
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
rcl
Riemerella columbina
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcl03036
]
NYR17_09085 (xerD)
Chromosome and associated proteins [BR:
rcl03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
NYR17_09085 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
WKS95060
LinkDB
All DBs
Position
complement(1919402..1920304)
Genome browser
AA seq
300 aa
AA seq
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MDWKESIQAFAHRLRFEKNFSENTIEAYTSDIQKLQYFAENHLDGVMPLTISYDQLQEYI
YQSAKKAISERSQARWISSIKAYFKFLFEEELREDQPATLLELPKLGLYLPDTLSLEEID
RITKAVDLDTPLGQRNLTIIETLYGCGLRVSELVNLKISNINFKENYMVVEGKGDKMRLV
PLADYTAALMWQYMQESRAKLKISPKASDVLFLNQRGSGMSRVMVFLIIKDLAQKADIHK
NISPHTFRHSFATHLLKNGADLRYIQEMLGHSSITTTEIYTHIEKAELHDTIIKYHPRNQ
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggattggaaagaaagcatacaagcatttgcccacaggctgaggtttgagaaaaatttc
tcggaaaacaccattgaagcctataccagtgatattcagaagttgcaatactttgctgaa
aatcatttagatggggtaatgccgctgacgatttcctacgaccaactgcaagaatacatt
taccaaagtgccaaaaaagccatcagcgagcgtagccaagcgcgttggatttcttctatt
aaggcttattttaaatttttgtttgaagaagaacttcgggaagaccagccagccacgctt
ttggagttgcctaaattggggctctaccttccagatacgctgagtttagaggaaattgac
aggattacaaaggcggtagatttggatacgccgttgggacagcgcaatttaaccattata
gaaactctttatggctgcggcttgcgggtgtcggagttggtcaatctcaaaatttctaat
atcaattttaaggaaaattatatggtggtagagggcaagggtgataagatgcgcttggtg
ccgttggcggattatactgcagcgctgatgtggcaatatatgcaggaatccagagcgaaa
cttaaaatatcccctaaagcttcggatgttcttttccttaaccagcgagggagcggtatg
tcgcgcgtgatggtctttctcatcattaaagatttggcgcaaaaagcagacattcataaa
aatatttcgccgcatacctttcggcattctttcgcaacgcatctccttaaaaatggtgcc
gatttacggtatatccaagagatgttagggcattccagcatcaccacaacggaaatttat
acccatatcgaaaaagcggaactccacgataccattatcaaataccatccacgaaatcag
taa
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