Riemerella columbina: NYR17_09120
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Entry
NYR17_09120 CDS
T09247
Name
(GenBank) succinate dehydrogenase/fumarate reductase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
rcl
Riemerella columbina
Pathway
rcl00020
Citrate cycle (TCA cycle)
rcl00190
Oxidative phosphorylation
rcl00650
Butanoate metabolism
rcl01100
Metabolic pathways
rcl01110
Biosynthesis of secondary metabolites
rcl01120
Microbial metabolism in diverse environments
rcl01200
Carbon metabolism
Module
rcl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rcl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NYR17_09120
00650 Butanoate metabolism
NYR17_09120
09102 Energy metabolism
00190 Oxidative phosphorylation
NYR17_09120
Enzymes [BR:
rcl01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NYR17_09120
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_7
Fer4_9
Fer4_10
Fer4_17
Fer2
Fer4_22
Fer4_18
Fer4_6
Fer4_2
Fer4_21
Fer4
Fer4_4
Fer4_16
Fer4_3
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
WKS95067
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Position
1927665..1928435
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AA seq
256 aa
AA seq
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MSAKKGLNLTLKIWRQKNNKSKGQFETYKISGVSTDSSFLEMLDMLNENLVNEGKEPVAF
DHDCREGICGMCSLYINGRAHGPDTGVTTCQLHMRMFKDGETITIEPWRSAAFPVIKDLV
VDRSAFDRVMAAGGFISVNTSGNTTDANNILIPKEDADKAMDAAACIGCGACVATCKNGS
AMLFVGAKVSQYALLPQGRIEAKRRVLKMVAAMDEEGFGNCSNTGACEVECPKGISLENI
ARMNREFMAATLTTAE
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaaaaaaaggacttaatctgactctgaaaatttggagacagaagaacaataaa
tcaaaagggcagtttgaaacttacaaaatctctggcgtatctacagactcctctttcttg
gaaatgctggatatgctcaatgagaatttagtgaacgagggtaaagagcccgtagctttt
gaccacgactgtcgcgagggtatctgcggaatgtgctccctctacatcaacggtagagcc
cacggtcccgatacaggcgtaaccacctgccagctccatatgagaatgttcaaagatggc
gaaaccattaccatagaaccttggcgaagcgccgctttcccagtgattaaagacttggta
gtggacagaagcgcctttgatagagtgatggctgcaggaggattcatctcggtgaatact
tcggggaataccaccgatgccaacaacatcttaatcccgaaagaagatgcagacaaagcg
atggatgctgccgcttgtattggttgcggtgcctgcgtggcgacttgtaaaaacggctct
gccatgctctttgtaggggctaaagtttctcagtacgcactgctaccacaaggtagaata
gaagccaaacgaagagtactgaaaatggttgccgctatggacgaagaaggcttcggtaac
tgctctaacacaggagcttgcgaggtagaatgtccaaaaggcatctcgttagaaaacatc
gcgaggatgaatagagaatttatggctgctacactcaccacagccgaataa
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