Riemerella columbina: NYR17_09180
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Entry
NYR17_09180 CDS
T09247
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
rcl
Riemerella columbina
Pathway
rcl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NYR17_09180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcl02000
]
NYR17_09180
Transporters [BR:
rcl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NYR17_09180
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DUF87
nSTAND3
AAA_29
ATPase
CbiA
DEAD
GvpD_P-loop
AAA_25
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WKS95079
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All DBs
Position
1944886..1946544
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AA seq
552 aa
AA seq
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MKALKTLNPYFWKHRKLLSWGVFFIIASNFFAIFQIQFVGKTVDVIHQVLSDQNIVKEVL
FRTLLINGGIIVGSSLLSGFFRFMMRQTIIVTSRKIEYELKNKIFKQYEKLSLTQYKATT
VGDLLNRLSEDVVAIRMYLGPGVMYVINLAILLIITSIYMLKTDVQMTLWTLIPLPILSF
VIYKVSSIINRKSKIMQKSQSAISTFVQDSFSGIRVVKFFNKEKYIEKNYGLKVKDYQDK
ALDLAKTEAYFFTIVLFVIGLLNVAILYIGGQKFINNEMTIGAIADFFMYINILIWPFSM
VGWVTSVNQRAAASMQRVNEFMEMQSEILNTNHSHYPIHGDIEFRNVSYTYPNTGIKALD
QLSFKIKAGESLAIMGKTGSGKSTIALLLCRLIDPDEGKIFIDGKNLKDHNIEAYRAALG
YIPQESYLFSDTIAQNIGFAVDQPSMEEIIHFAKIADIHKNIVDFKNQYETMVGERGVML
SGGQKQRICIARALIKEPKILIFDDSLSALDTETEENILENLRLMPEKSTRIIITHRLSS
AKNADHILHLED
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgcttaaaacccttaatccttatttttggaaacacagaaaactcttatcttgg
ggagttttcttcattattgccagcaacttttttgcgattttccaaattcaatttgtggga
aaaaccgtagatgtcatccaccaagttttatccgatcaaaacatcgtgaaggaggtttta
ttccgtactttgctcatcaatggtggaattattgtaggcagctccttgctctcaggattt
ttccgttttatgatgcgacagaccatcatcgtaacttcaagaaaaatagagtacgaactc
aaaaataagatttttaaacaatacgaaaaactctctctcacccaatacaaagccacgaca
gtaggggatttactcaaccgtttgagcgaagatgtggttgccattaggatgtatttgggc
cctggggtgatgtatgtgatcaacttggctattttgctcatcatcaccagtatttatatg
ctcaaaaccgatgtgcagatgacgctctggaccttaattccgctgcctattctctccttc
gtgatttataaagtgagctccatcatcaaccgaaaatctaaaattatgcaaaagagccaa
tcggcgatttctacttttgtgcaagatagtttttcgggcattcgtgtggttaaattcttt
aacaaagaaaaatatattgaaaaaaattatggtcttaaagttaaagattatcaagataaa
gccttggacttagccaaaacagaagcttatttttttaccattgtgctctttgttatcggc
ttgcttaatgtagcgattttatacattggagggcaaaaatttatcaataatgaaatgacc
ataggcgctattgccgatttttttatgtacatcaacattctgatttggccgttctctatg
gtcggttgggtgacctccgttaatcaaagagctgccgcctctatgcagcgggttaatgag
tttatggaaatgcaatcggaaattctgaacaccaaccacagccactatcccatccacggc
gatatagagttccgaaatgtgagctacacctatcccaacacgggcattaaggctttggat
cagttgagttttaaaataaaagcaggcgaatccctcgctattatggggaaaacaggaagc
ggaaaatcaactattgcgctgttgctttgccgtttaatagaccctgatgagggcaaaatc
ttcatcgatggaaaaaacctcaaagaccataatatagaggcttaccgtgcggcattgggc
tacattccgcaagaaagttaccttttctcggataccattgctcagaatattggttttgcc
gtagatcagccttctatggaagagattatccattttgcgaaaatcgcagatattcataaa
aatattgtggatttcaaaaatcaatatgagacaatggttggcgaaagaggcgtgatgctt
tctggaggacaaaaacagcggatttgcattgccagagctttaatcaaagaaccgaaaatc
ctcatttttgatgatagcctctccgccttagacaccgaaacggaagaaaatatccttgaa
aatctgcgtttaatgccagaaaaaagcactcggattatcattacccaccgcctatccagt
gcaaaaaatgccgatcatattctgcatttagaagattaa
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