Riemerella columbina: NYR17_09370
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Entry
NYR17_09370 CDS
T09247
Symbol
pckA
Name
(GenBank) phosphoenolpyruvate carboxykinase (ATP)
KO
K01610
phosphoenolpyruvate carboxykinase (ATP) [EC:
4.1.1.49
]
Organism
rcl
Riemerella columbina
Pathway
rcl00010
Glycolysis / Gluconeogenesis
rcl00020
Citrate cycle (TCA cycle)
rcl00620
Pyruvate metabolism
rcl00710
Carbon fixation by Calvin cycle
rcl01100
Metabolic pathways
rcl01110
Biosynthesis of secondary metabolites
rcl01120
Microbial metabolism in diverse environments
rcl01200
Carbon metabolism
Module
rcl_M00003
Gluconeogenesis, oxaloacetate => fructose-6P
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
NYR17_09370 (pckA)
00020 Citrate cycle (TCA cycle)
NYR17_09370 (pckA)
00620 Pyruvate metabolism
NYR17_09370 (pckA)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
NYR17_09370 (pckA)
Enzymes [BR:
rcl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.49 phosphoenolpyruvate carboxykinase (ATP)
NYR17_09370 (pckA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PEPCK_ATP
PEPCK_GTP
MafB19-deam
Motif
Other DBs
NCBI-ProteinID:
WKS95110
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Position
complement(1978305..1979900)
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AA seq
531 aa
AA seq
DB search
MEKIRQYLEKNGIKNPTEIVYNPSYERLFQDEMSEANQGFEKGELTDSGAVAVKTGIFTG
RSPKDRFIVKDKTTEDTIWWDGKINRPTTDEVFQSCKKLVTDELSNKKLYVVDTFCGTNP
DTRLKVRFVMEVAWQAHFVTNMFIRPSHYELEHYGEPDFLVMNGSKVTNPNWEAQGLNSE
NFVMFNLTEKTQIIGGTWYGGEMKKGMFSMMNYYLPLKGMASMHCSANVGEEGDVAVFFG
LSGTGKTTLSADPKRYLIGDDEHGWDDNGVFNYEGGCYAKVIDLSEEKEPDIWRAIKRDA
LLENVVVKEDGKVDFADGSITENTRVSYPIYHINKIVLPSKAGHAKKIIYLSADAFGVLP
PVSILTDEQAQYHFLCGYTSKLAGTERGITEPTPSFSPAFGEAFLSLHPTMYSKTLIGKM
KEHGAKAYLVNTGWNGTGKRISLKDTRAIIDAILDGSIDKAETAVIPVMNLEYPTSLPNV
TEGILDPRATYADASEWEEKAKFLAAKYIKNFEQYTDTEEGKALVAAGPQL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatcagacagtatttagagaaaaacggtattaaaaacccgacagaaatcgtt
tataatccgtcttatgaaaggttatttcaagatgaaatgagcgaggctaaccaaggcttt
gaaaaaggagaattaaccgattctggcgctgtagctgttaaaactggaatttttacaggg
cgctcgccaaaggacagatttattgtaaaagataaaaccacagaagataccatttggtgg
gatggaaaaatcaatagaccaaccacagatgaggttttccaaagctgtaaaaaattggtt
acagatgagctttctaacaaaaaactttatgtggtagacactttctgtggtaccaacccc
gataccagattaaaagtaagatttgtaatggaggtggcgtggcaggcgcattttgtgacc
aatatgttcatccgcccatctcactatgaattagagcattacggcgagcctgatttttta
gttatgaatggctccaaagtgaccaacccgaactgggaagcacaagggctcaattcagaa
aattttgtgatgtttaacctaaccgaaaaaacacaaatcatcggtggaacttggtacggt
ggtgagatgaaaaaaggaatgttctctatgatgaactattacctaccgcttaaaggtatg
gcatctatgcactgttctgccaatgtaggcgaagaaggcgatgtagcggtattcttcggg
ctttctggaacagggaaaaccacactttctgctgaccctaagagataccttatcggtgat
gatgagcacggttgggatgataatggcgtgttcaactacgagggcggttgctatgctaaa
gtgattgacctttcagaagaaaaagaaccagatatttggagagccatcaagagagatgct
ttacttgaaaatgtggtggtaaaagaagacggaaaagtagactttgccgatggttctatt
accgaaaataccagagtttcttatccaatttatcatatcaataaaattgtattgccatct
aaagcagggcacgctaaaaagattatttacctttctgcagatgctttcggggtattgcca
ccagtatctattttaacagatgagcaggcacagtaccacttcctttgcggttatacttct
aaattagcaggtacagaaagaggcattacagagcctacaccatctttctctccagcgttt
ggtgaggcgtttttatccctccacccgactatgtattctaaaactttaattggcaaaatg
aaagaacacggcgccaaggcctacttagttaatacaggttggaacggtacgggtaagaga
atttcattaaaagacaccagagcgattattgatgccattttagatggttctatcgataaa
gcggaaactgcagtgatcccagtgatgaatttagaatatccaacatcactaccgaatgtg
accgaaggaattttagacccaagagccacttatgctgatgcttctgaatgggaagaaaaa
gcgaaatttttggcagctaaatacattaaaaactttgagcaatatacagatactgaggaa
ggtaaagctttagtagctgcaggacctcagttataa
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