Riemerella columbina: NYR17_09385
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Entry
NYR17_09385 CDS
T09247
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
rcl
Riemerella columbina
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GFIT
Motif
Pfam:
LysM
Peripla_BP_6
LysM3_LYK4_5
ANF_receptor
AAA_lid_6
Motif
Other DBs
NCBI-ProteinID:
WKS95113
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Position
complement(1981959..1983851)
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AA seq
630 aa
AA seq
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MKKILIAPLFLLSFWMQAQTHTVSEKETPYSISRKYGLSLQDLYRLNPEIKDGTLQIGQV
IKVGKGAAKTTAQPTKTSTSVKTGTIILQPKQTIYGITRQYHISEAELRALNPRLEMKIG
EEVTLPLDKINQYADQRAQTPVTTITSEEVNTQPVETQPASEQRPIGADEYQVQPKDNYY
KISRRFKISRKDLFALNPGLEETGLKVGDVIKVRYAENQAPAPTKAAPEQTYSTTSTQDD
YVTYTVQSGDTIFGILNRFDVDLEELMRLNPQLADGLKAGMVLKIKKLNPAYIKKNEDAL
SVVLMLPFGFDTGDAKYRSLSTDFMAGAKLAVEMNAAKGQKLDFRIIDAGNEGSFKKNLM
QINTANTDLIIGPLFKSNVIEVLDYVKQSQIPVVAPFANSPEMYDYSNLIIAETDKLIYA
DRIVKEVKEAFSNQKIYIVAGKSQDNARYIQNQFQKTLKNAEVKIVAQPSEIALEQNMMT
GQSAPVIAILADDTDAVGAAFSSKIIDLAKETKGIKAFSMFYTPSFDKKVDELSQASLVY
IMDRKINTDGSFEKEVLKAYQNKYCKAPSKYAVIGFDIVNDMLSRENAKGEIFKQMGKSQ
TQLATKFEFERVKSGGAYVNVGYRVVRLLP
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatattgatagcaccgctttttctattgagcttttggatgcaggctcaaaca
cataccgtttcggaaaaggaaaccccatattctatttccagaaaatatggactttcgctt
caagatttgtaccgtctcaatccagaaattaaggacggaacactccaaataggacaagtc
attaaagtggggaaaggcgccgccaaaaccacagcacaacctacgaaaaccagcacttcg
gtgaagacaggaaccattatcctacagcctaaacagaccatttatggcattacgagacag
taccacatttcggaggcggagcttagagcgctcaaccctcgtttagagatgaaaatcggt
gaagaagtgactttgccgttggataaaatcaaccaatatgctgaccaaagggcgcagaca
ccagtgactacgatcacttcggaagaggtcaatacgcaacctgtggaaacgcaaccagcc
tcggagcaaaggcccattggtgcagatgaatatcaagtgcagccaaaagacaattattat
aaaatcagtcgccgttttaaaatcagccgaaaagatttattcgccctcaacccagggtta
gaagaaacagggctaaaagtaggcgatgtgattaaggtaagatatgctgaaaaccaagcg
ccagcacctaccaaggccgctccagaacagacttatagcaccacaagtacacaagatgat
tatgtgacatataccgtgcaaagtggcgataccattttcggaattcttaaccgttttgat
gttgatttagaagaattgatgcgcctcaaccctcaacttgccgatggcttgaaagcagga
atggtgcttaaaataaagaaactcaacccagcgtatatcaagaaaaatgaagatgccctt
agcgtggtgctgatgttgcccttcggttttgatacaggcgatgcgaagtacagaagccta
tccacagattttatggcaggggctaaattggcggtggagatgaacgccgcaaaggggcag
aagttagatttcagaatcatagatgctggcaatgaaggctctttcaagaaaaatttaatg
caaatcaacacggcaaacaccgatttaatcattggaccgttatttaaatccaatgtgata
gaggtgttagattatgtgaaacagagccaaatccctgtggtggcaccgtttgccaacagc
ccagagatgtatgactacagtaatttaatcattgcggaaacggataaactcatctatgcg
gataggattgtaaaagaggttaaggaggcgttttctaatcagaaaatttacattgtggca
ggcaagtcgcaggacaatgctcgctatatccaaaaccaatttcaaaaaaccttgaaaaat
gcagaggttaaaatcgtggctcaaccttcagagatcgcattggagcaaaatatgatgacg
ggacagagcgcaccagtcatcgctattttagccgatgatactgatgctgtgggtgcagca
ttttcatcaaaaatcatagatttagccaaagaaaccaaaggcattaaggcgttcagtatg
ttctacacgccatcttttgataagaaagtagatgagctgagccaagcctcgttggtgtac
attatggacagaaaaattaataccgatggtagttttgagaaagaagtgcttaaggcttat
cagaataaatattgcaaagcaccatctaaatacgccgtgatcggttttgatattgtgaat
gatatgctctccagagagaacgctaaaggcgagattttcaagcaaatgggtaaatctcaa
acccagttagcaaccaaatttgaatttgaacgcgtgaagtctggcggcgcctatgtgaat
gtaggttaccgcgtggtaaggcttttaccgtaa
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