Rickettsia canadensis McKiel: A1E_01055
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Entry
A1E_01055 CDS
T00603
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
rcm
Rickettsia canadensis McKiel
Pathway
rcm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A1E_01055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcm03400
]
A1E_01055
DNA repair and recombination proteins [BR:
rcm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A1E_01055
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A1E_01055
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
Kinesin
AAA_7
T2SSE
P-loop_SecA
AAA_5
Microtub_bd
DUF87
LarB_N
UB2H
SWI2_SNF2
DUF5638
Motif
Other DBs
NCBI-ProteinID:
ABV73159
UniProt:
A8EXS6
LinkDB
All DBs
Position
complement(239262..241247)
Genome browser
AA seq
661 aa
AA seq
DB search
MNNFSIISEYKPAGDQPKAIDEIIAGLNSKKRSQMLLGITGSGKTFTMANIIARMNRPTL
IMAHNKTLAAQIYSEMKLMFPKNAIEYFVSYYDYYQPEAYIARTDTFIEKDSSINEQIDL
MRHSATRSLLERRDVIVVSSVSCIYGLGSPNLYYQMTVNLESGKSYPRDKLLSDLVNLQY
ERNDIGFERGCFRVKGDNIDIFPSHYSDKAWRLSFVGNELEYIHEFDPLTGTKLAKLDKA
MVFGNSHFVIPQETVNKAISEIEVELQKRLELLKSQNKILETQRLNQRTQYDLEMLTTTG
SCKGIENYSRFLTGRNAGEPPPTLFEYLPKDALLFVDESHVSVPQIRAMYNGDRARKKVL
VEHGFRLPSALDNRPLKFEEWEKFRPQTIFVSATPGPFELEETGGLVVELIIRPTGLLDP
ECIIKPATNQVEDLISEIQTTIAKGLRVLVTTLTKKMAEDLTTYLQELKYKSSYLHSNVH
TLERLEILRDLRQGTINILVGINLLREGLDIPECGLVAILDADKEGFLRSEVSLIQTIGR
AARNSEGRVILYADKITKSIDKAVSETMRRRQIQQEYNEKHGIIPQTINRTIYALTALKK
IDSKLDKKQAHILFDNPAKLKAHIYKLKKAMLKAASNLEFEQATKLRDQLKNLEEAALEL
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaataatttttctattatctcagaatataaaccggcaggagatcagccaaaagcaata
gatgaaattatagcaggattaaatagcaagaaacgttcccaaatgttgctcggtattacg
ggatcaggtaagacttttactatggcgaatattattgcaagaatgaatcgccctactctt
attatggcacataataaaactttagctgctcaaatttattcagaaatgaaattgatgttc
ccgaaaaatgccattgagtattttgtctcatattatgattattatcagcccgaagcttat
atagcacgcactgatacttttatagaaaaagactcatcaattaacgagcagattgattta
atgcgtcattccgctacaagatcactcttagaaagacgtgacgttatagtagtttcttcc
gtttcatgtatttacgggcttggctctcctaatttatattaccaaatgacggttaattta
gaatcaggtaaaagctaccctcgtgataaactactaagtgatttggtaaatctgcaatat
gagcgtaatgatattgggtttgaacgtggctgttttcgggttaaaggtgataatatcgat
atttttccatcacattatagcgataaagcttggcgtttatcgtttgttggcaatgaactc
gaatatatacatgaatttgatcccctaacaggcacaaaacttgctaaactcgataaagct
atggtctttggtaattcacatttcgtgataccgcaagaaacagtaaataaagccatatca
gagattgaggtagagttacaaaaacgcttagaattattaaagtcacaaaataaaatactt
gaaacccaaagactaaatcaacgtactcaatatgatcttgaaatgttaactacaaccggt
agctgtaaaggcattgaaaattattcgagattccttacaggacgtaacgccggtgagcca
ccaccgactttgtttgagtatctaccgaaagatgcgttattatttgttgatgaaagccat
gtatccgtaccacaaattagagcgatgtacaacggtgatcgagcaagaaaaaaagtattg
gtagagcatgggtttcgtctgccttctgctcttgataatagacccttaaaatttgaagaa
tgggaaaaatttagaccgcaaaccatttttgtatctgcaactccgggaccattcgagtta
gaagaaaccggcggccttgtagtagaattaattatcagacctacgggactgcttgatcct
gaatgcattataaagcctgctactaaccaagttgaggatttaattagcgagattcaaacc
actattgctaaaggtttgcgtgttttagtcaccaccttaacaaaaaaaatggcagaagat
ttaactacctatttacaggaactaaaatataaaagctcttatttacattctaacgttcat
acacttgaacgtcttgaaatattaagagatttaagacaaggtactatcaatattttagta
ggtattaatttgcttcgtgagggacttgatatccctgaatgcggtttagtagccatactt
gatgctgacaaggaagggtttttacggtcagaagtatcgttaatacaaacgattggaaga
gctgcacgcaatagcgagggcagagtaatactttatgctgataaaataactaaatctatt
gataaagctgttagtgaaacgatgcgtagacgacagattcaacaagaatataatgaaaaa
cacggcataattccacaaactatcaaccgtactatttacgctttaacagcacttaagaaa
atcgatagtaaacttgataaaaaacaagctcatattttatttgataaccctgctaaacta
aaagctcatatttacaaattaaaaaaagcaatgcttaaagctgcaagtaatcttgaattt
gaacaagccacaaaacttcgtgatcagctaaaaaatctagaagaggcagcgttggaattg
agctaa
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