Rickettsia canadensis McKiel: A1E_03865
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Entry
A1E_03865 CDS
T00603
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rcm
Rickettsia canadensis McKiel
Brite
KEGG Orthology (KO) [BR:
rcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcm03032
]
A1E_03865
03400 DNA repair and recombination proteins [BR:
rcm03400
]
A1E_03865
Enzymes [BR:
rcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A1E_03865
DNA replication proteins [BR:
rcm03032
]
Prokaryotic type
DNA Topoisomerases
A1E_03865
DNA repair and recombination proteins [BR:
rcm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A1E_03865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
POLR3C_WHD
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ABV73700
UniProt:
A8EZB7
LinkDB
All DBs
Position
791189..793522
Genome browser
AA seq
777 aa
AA seq
DB search
MKLVIVESPAKAKTINKYLGDEFKVIASFGHIRDLPSKKGSVLPDENFAIKYDISDKASK
YVDAIVKDAQKADAVYLATDPDREGESISWHVAEVIKEKNKVKAADFFKRVAFNEITQKA
IIHAVENPRKLDTNLVNAQQARRALDYLVGFTLSPLLWRKLPGCKSAGRVQSVALRLICE
REDEIERFKAEEYWDISLKMQNSNNELFTAKLTHINNQKLERFSITNKKDAKDLTKKLKS
QNFHIDQIEKKQQKRQPQPPFITSSLQQEAARKLGFSAKKTMQIAQKLYEGVDIGKETIG
LITYMRTDGVTLSNDAVADIRKLIDKNYGDKYLPSSPRIYKSTVKNAQEAHEAIRPTNIT
YTPDSLKEKLAKDYYKLYELIWKRTIACQMENVIMDLVVANLASENKEYLAKANGSTIAF
DGFYKVYRESVDDEAEEENKMLPLLKENEQLNTKEIIPNQHFTEPPPRYSEASLVKKLEE
LGIGRPSTYATILSVLQDRKYVSLKKKRFMPEELGRLVTVFLVGFFKKYVEYDFTAGLEN
ELDEIAAGKLEWKSALSNFWSGFNHNIKSVNEQKITEIISYVQKALDYHLFGENQESKAC
PSCKTGELSLKLGKFGAFLACNNYPKCTFRKSIVSGNNNNENEDKLSTTPNEENKVLGTD
KDGIEIYLKKGPYGPYIQRGEHEGTVKLKRSPVPASLNQSDITLDIALKLLSLPLKIGTH
KDTHEEIMIGYGKFGPYIKYIGKFISIPKKYDFLNLSLDEAIQLIEDNKTKLEKKQA
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagtaatagtagaatcgccggcaaaggcaaaaacaataaataaatatttaggt
gacgagtttaaggttattgcatcattcggtcatataagagatttaccttctaagaaagga
tcagtattacctgatgaaaattttgcaataaaatatgacatttcagacaaagccagtaaa
tatgtagacgcaatagttaaagatgcgcaaaaagccgatgcggtatatcttgcaaccgat
ccggatcgtgagggtgaatctatctcatggcatgttgcagaggtaataaaagaaaaaaat
aaggttaaagccgctgattttttcaaaagggtagcctttaatgaaatcactcaaaaagca
attattcatgccgttgagaaccctagaaaacttgacactaatttagtaaatgctcaacaa
gcaagaagagctttagactatttagtcggctttaccctttcacctcttttatggcgtaag
ttacccggatgtaaatcagcaggacgtgtacaatctgtggctctgcgattaatatgtgag
cgagaagatgaaatagagcgttttaaggccgaagaatattgggatattagccttaaaatg
caaaatagtaataacgaactatttactgctaaattaactcatataaacaatcaaaaacta
gaaagattctcaattactaataaaaaagatgcaaaagatttaaccaaaaaattaaagtct
caaaattttcatatcgatcagatagaaaagaaacaacagaaacgtcaaccgcaacctcct
tttattacttcatcgctacaacaagaagcagcacggaaattaggttttagtgctaaaaag
actatgcaaatagcacaaaaactttatgagggggttgacataggtaaagaaactataggg
cttattacctatatgagaaccgacggtgttacattatcaaatgatgcagtagcagatata
cgtaagttaatcgataaaaattatggcgataaatatttaccgagtagccctagaatttat
aagtccacagtaaaaaatgctcaagaagctcatgaagcgataagaccgacaaatataacg
tatactcctgatagcttaaaagaaaaactagcaaaagactattataaactctatgaacta
atttggaaaagaactatagcctgccaaatggaaaatgttataatggatttggtagttgca
aatttagcttcagaaaataaagaatatttggcaaaagcaaatggatcaactatagccttt
gatggattttataaggtttatcgtgaaagtgtagacgatgaagcagaggaagaaaataag
atgctgccgcttttaaaagaaaatgagcaactaaacactaaagaaattattccaaatcag
cattttacagaaccgcctccaagatattcggaagcaagcttagtgaaaaaacttgaagag
cttgggatcggtcgcccatccacctatgctactattttatcagttttacaagatcgaaaa
tacgtttctcttaagaaaaaacgttttatgcctgaagagctgggacgtttggtaacagta
tttttagttggttttttcaaaaaatatgtagaatatgactttaccgcaggtcttgaaaat
gaattagatgaaatagcagccggcaagcttgaatggaaatctgccttaagtaatttttgg
agtggttttaaccataatattaaatcggtaaacgaacaaaaaataactgagattattagc
tatgtacagaaagcccttgattatcacttgtttggtgagaatcaagaatccaaagcttgt
ccttcatgtaaaacaggtgaacttagtttaaagctcggtaaatttggagcgtttttagca
tgtaacaattaccctaaatgtacttttagaaaatctattgttagcggtaacaataataac
gagaatgaggataagctttctactactcctaatgaggagaataaagttttaggcaccgat
aaagatggaatagaaatatatctgaaaaaaggaccttacggaccttatattcaacgcgga
gaacatgaaggtacagtaaaactgaaacgtagccccgtacctgctagcctgaaccaaagc
gatatcacacttgatatagcattaaagcttctaagcttaccgcttaaaattggtactcat
aaggatactcacgaggaaattatgataggatacggtaaatttggtccttacataaaatat
attggtaagtttatttcaatcccaaagaaatatgattttctaaatttaagcttagatgag
gcaatacagctaatcgaagacaataagacaaaattagaaaagaaacaagcgtga
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