Rickettsia canadensis McKiel: A1E_04250
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Entry
A1E_04250 CDS
T00603
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rcm
Rickettsia canadensis McKiel
Pathway
rcm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rcm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A1E_04250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcm03021
]
A1E_04250
03400 DNA repair and recombination proteins [BR:
rcm03400
]
A1E_04250
Enzymes [BR:
rcm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A1E_04250
Transcription machinery [BR:
rcm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A1E_04250
DNA repair and recombination proteins [BR:
rcm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A1E_04250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
IDH
Motif
Other DBs
NCBI-ProteinID:
ABV73775
UniProt:
A8EZJ2
LinkDB
All DBs
Position
complement(865758..866780)
Genome browser
AA seq
340 aa
AA seq
DB search
MLSLSKNWNALIKPNKVAYENVSETNNKAKIVVEPLERGFGLTLGNAMRRVLLSSLQGAA
ITSIKIPAIEHEFSAIPGVKEDVSEMILNIKGIEVKMYVAEKRIIKLKAIGPCVVTAGMI
ETGHDVEILNPDHVICNLAKNKQLEMELTCKVGKGYVLSTNSYADNLPIGEIAIDALFNP
VKSVTYKVENTRVGQVTDYDKLIMFVETNGDLLPEMAVGLAARILQEQLQLFISFEEQEE
DKQVKTDALPFSPYLLKRVDELELSVRSANCLKNDNIIYIGDLVKRTEADMLRTPNFGRK
SLNEIKEILAKLNLRFGMDVPDWPPENIQELSKRYEDSDN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgttaagtaaaaattggaatgctttaataaagccgaataaagtcgcttatgaa
aatgtttcggaaactaataataaagctaaaattgtagttgaacctttagaaagaggtttt
ggtttaactttaggtaatgctatgagaagagtattactttcttctttacaaggagcggct
atcacttctataaaaatccctgctatagaacatgaattttctgctatacctggtgtaaaa
gaagatgtatcggaaatgattttaaacattaaaggtattgaagtaaaaatgtatgttgcg
gaaaaacgtatcataaagttaaaagcaataggaccttgtgttgtaacggccggtatgatt
gaaacagggcatgatgtagaaatactgaatccggatcatgtcatttgtaatctagctaag
aacaagcagcttgaaatggagttaacttgtaaggttggtaaaggatacgtactgagcaca
aatagttatgcggataatttaccgattggtgaaatagctatagatgctttatttaatccg
gtaaagagtgttacttataaggtagaaaatactagggtaggtcaggttaccgactatgat
aaattaattatgtttgttgaaactaacggtgatttattacctgagatggctgtagggtta
gctgcacgtatcttacaagagcaattacaattatttatttcttttgaagaacaggaagaa
gataagcaagttaaaactgatgctttaccattttcaccttatttacttaagagagttgat
gaattggaattatcagttagatcagcaaattgtttgaaaaatgataatataatatatata
ggggatttagtaaaaagaacagaagccgatatgctgagaactccaaattttggtagaaaa
tctttaaatgagattaaggaaatattggcaaaattaaatttaagatttggtatggatgta
ccagattggccaccagaaaatattcaggaattatctaaacgttatgaagattctgataat
taa
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