Rickettsia canadensis McKiel: A1E_04480
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Entry
A1E_04480 CDS
T00603
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rcm
Rickettsia canadensis McKiel
Pathway
rcm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A1E_04480 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcm03400
]
A1E_04480 (xseA)
Enzymes [BR:
rcm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
A1E_04480 (xseA)
DNA repair and recombination proteins [BR:
rcm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
A1E_04480 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ABV73821
UniProt:
A8EZN8
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All DBs
Position
901389..902171
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AA seq
260 aa
AA seq
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MKIATWNINSIKTRLNLLRNFLSKENPDILLLQEIKCETEKFLFDELSDLPYNLYVHGQK
TYNGVAIISKFPANEIIKDFPNNYCSDQARFLEIKLSLPIGLCNIISLYAPHGSFVGSDK
FVTKLAFYESLINYLSTKKSFDEKTIIGGDFNIAPFDIDVYSPKALAETTCFTKVEQKKL
RTILNSRFEDLYRLMYPNKQEFSWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYMDY
NLRTQEKPSDHIPVIANFKE
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagctacttggaatattaattccatcaaaacaagacttaatttattgcgtaat
tttttgtctaaagaaaatcccgatattttattattacaagaaataaagtgcgaaaccgaa
aaattcctgtttgatgaattatccgatttaccttataatttgtacgttcacggacaaaaa
acatataacggtgttgctataatctcaaaatttcctgccaatgaaataattaaagacttt
ccgaataattactgcagtgatcaagcaaggttcttagaaataaaattatcactacctata
gggttgtgtaatatcatctcgctctatgctcctcacggttcatttgtcggtagcgataaa
tttgtaacaaaactagcattttatgaatctctaatcaattatctatcaactaaaaaatct
tttgatgaaaaaactatcattggtggtgatttcaatattgcaccgtttgatatagacgta
tattcacctaaagcattagctgaaactacttgttttactaaggttgaacaaaaaaaatta
cgaactattctaaattccagatttgaggatttatacagattgatgtatccgaataaacaa
gaattttcatggtgggattatagagctggatgttttgaacaaaataaaggtatgaggatt
gatatgatccttggttgtaataatactattgactatttagaaaattgctatatggattat
aatttaaggactcaagaaaaaccttcagatcatataccggtaattgctaattttaaggaa
taa
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