Rosa chinensis (China rose): 112163923
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Entry
112163923 CDS
T06020
Name
(RefSeq) cyclic nucleotide-gated ion channel 1 isoform X2
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112163923
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcn04040
]
112163923
Ion channels [BR:
rcn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112163923
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Motif
Pfam:
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
112163923
NCBI-ProteinID:
XP_024155972
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Position
1:complement(30401918..30409842)
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AA seq
627 aa
AA seq
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MSEQAVVDIWHSEAAKGKAQREGHRSRKIWPKLKDILRSFLLSWWKTIFTISCMLSVSVD
PLFLYIPVTNEDMKCLRLDHNLKTVTLLLRSAVDLPCIVNIISQILAVRPRQRRRVKLVE
MAKRILWPYFLVDILAVLPIPHVVILILLTRTRKISNPNARKLLNSLILFQYFPRIFRMY
QSCKVNKEEPDEEEADKTRYGDHGHRICFKVYKFILASHVLGAFWYFFSIQRAMDCWQYA
CRKEKKCGDNTFDCGGNHSFKNVTFINDFCPISTPNPTLFNFGIFMEALQSNIVGSTDFP
QKFLHCFWWSLQSLSSFGQTLETSTYAWENLFAVCISVIGMILFLIYLNAVLQFVTTTSE
RHKREMISKEVDLWLFRKGLPSNLKQVIMHFMIQKLKQKIDVGVDDILSILPSTHRKYIE
RFLRLAILKKVPMLQTKDVKMLKEICEHLQPVHYPEDICIIGEGERLSKMIFITNGTVQT
YKTNGEGGRIGSKFLEKGDFYGSKELLNWASKLSSFDDLPISTRMVKPIMKVEAFVLSAE
DLKNVVRKFWWHFTKDKDLTEFSEPVLEELALSTIKQIRRKAKKKQAIRSLNNQLAMGRP
SMNLQRVVSRAMWDQLPSPVQSPAHSL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacaagccgttgtggatatttggcattcagaggctgccaaggggaaagctcaa
cgtgaaggacacagatcaagaaaaatatggcctaaactaaaggatattcttcggtctttc
ctgctaagttggtggaaaactatatttacaatctcctgcatgctttctgtctccgtggat
ccgttgttcttatacattcctgtcaccaatgaagacatgaaatgtctcagattggaccat
aatctcaagacagtcactcttttgttacgatcggccgtcgatctcccatgtatagtgaac
atcatttcccaaattcttgctgtgaggccacggcagcgccggagggttaaattagtggag
atggctaagcggattttatggccatacttcctggttgatattttagctgttcttcccatt
ccacatgtagtaatccttattttacttacaagaacgagaaagatttcgaacccgaatgcg
aggaagttgctaaactctcttattctattccaatattttccacgaatttttcgcatgtac
caatcatgtaaggtcaataaggaggagcctgatgaggaggaggctgataagactcgttat
ggcgaccatggacatcgaatatgtttcaaggtgtacaagtttatccttgcgagtcatgtg
ctcggagccttttggtacttcttttctattcaacgagctatggattgttggcaatatgca
tgtcgaaaagaaaagaaatgtggagataatacttttgactgtggtggcaatcactcattt
aagaatgtcacatttataaatgatttttgccccataagtacaccaaatccaacactcttc
aattttggtatatttatggaggcacttcaatctaatatagtgggatcaacggattttcca
caaaagttcttgcattgtttttggtggagtctgcaaagtctaagctcatttggtcaaact
ctcgagaccagtacttatgcttgggaaaatctctttgcggtttgtatctctgtaattgga
atgatactattcttaatatatctgaatgcagttttgcagttcgtaactacaacatcggaa
agacacaagagggaaatgataagtaaggaggtagatttgtggctatttagaaaaggcctg
cctagcaatttgaagcaagtgatcatgcatttcatgatacaaaaacttaaacagaagata
gatgttggggtggatgatatactctctattcttccttcgacacatcgtaaatacatcgag
cgttttcttcgtttggctatccttaaaaaagtgccaatgcttcaaactaaggatgtaaaa
atgttgaaagaaatatgcgagcacctccagccggtgcactatcctgaggacatttgcatt
attggagagggagagcgactatctaagatgattttcatcacaaatggcactgtacagaca
tacaagactaatggtgaaggtggaagaattggttccaagtttcttgagaaaggggatttc
tatggatcaaaagagcttctcaattgggcatcaaagttgagctctttcgacgacttacca
atctcgaccagaatggttaagcctatcatgaaagtcgaagcctttgtactgagtgcggag
gacttgaagaatgtagtccgtaagttctggtggcatttcaccaaggacaaggatctaact
gagttcagcgagcctgtgttagaggagctagcattatctaccataaaacaaatccgtcgc
aaagcgaaaaagaagcaggcaattaggtccctcaataatcagctggccatgggtaggcca
agtatgaacttgcaacgggtcgtcagcagggccatgtgggatcagctaccgtctccggtt
cagtctccggctcattctctataa
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