KEGG   Rosa chinensis (China rose): 112164482
Entry
112164482         CDS       T06020                                 
Name
(RefSeq) cyclin-T1-4 isoform X1
  KO
K15188  cyclin T
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    112164482
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rcn03021]
    112164482
Transcription machinery [BR:rcn03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     112164482
    Brd4/P-TEFb complex
     112164482
    7SK RNP complex
     112164482
SSDB
Motif
Pfam: Cyclin_N CycT2-like_C Cyclin_C TFIIB MRP-S34 Cyclin_C_2
Other DBs
NCBI-GeneID: 112164482
NCBI-ProteinID: XP_024156456
LinkDB
Position
5:20162282..20168129
AA seq 596 aa
MAGFLPAESSHSGITGMYDGGSSNAQERLEEGSCWYFYRKEIEENSPSRLDGIDLKKETY
LRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHARNDRRTIATVCMFLAGKVEE
TPRPLKDVIIVSYEIIHKKDPAAVQKIKQKEVYEQQKELILSGERVVLATLGFDLNLLHP
YKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLP
SDGEKVWWQEFDVTPRQLEGGCPHFNSVEVSNQMLELYEQNRAPASNEVEGSTASGASHR
APPKGTASNEEHATRPGTLKSSSSRPASEHSDVDNGDGPPRTTQSRNNDCRSTETNNASD
QNVDVECKDNQHPRPMSSHQEKGGQSLNASKFASDGCGEGQDNNGTCETREAGELQDKQF
DRSVENRTGALGQSPQDVIKKIDRNKVKAALEKRRKSQGDMARKKDLMDEDDLIERELED
GIELAAGSQSRSKPSNGPEHENIHDGKHQDSVGYGGTDINTVEEGEVSAHDDGGQGYQSP
KRKAESPNLDAVEKKQRRDYEPGTSHHNGFDYGEDHGRRVGHSERDQKRQAQENHV
NT seq 1791 nt   +upstreamnt  +downstreamnt
atggctggttttttgccggctgagtcctctcatagtggaatcactggtatgtatgatggt
gggtcctctaatgctcaggagaggctggaggagggatcctgttggtacttttacagaaag
gaaattgaagaaaattctccatctagactagatggcattgacttgaagaaggagacatat
ctacgcaagtcatactgtacttttctacaagatttgggcatgagacttaaagtaccccag
gtaacaattgcaacagccataattttctgtcaccgattttttcttcgacaatcacatgca
agaaatgatagaaggactattgcaacagtttgtatgtttcttgctggcaaggttgaagaa
actccacggccactgaaagatgttatcatcgtttcttatgaaattatacataagaaggat
cctgcagcagttcagaagatcaagcaaaaggaggtatatgaacagcagaaagaactaatt
cttagtggagagagggttgttcttgcaactcttggttttgatcttaatttactgcatcct
tataaaccccttgttgaggcgataaagaaatttaaagtagctcaaaatgcccttgctcaa
gttgcatggaatttcgtcaatgatggacttcggacatctctttgcttgcaatttaaaccc
caccacattgcagctggtgccattttcctcgctgccaaattcctcaaagtaaagctcccg
tcagatggcgagaaggtctggtggcaagagtttgacgtcaccccacgccagttggagggt
gggtgtcctcattttaattcagtagaagttagcaatcaaatgttggaactttatgaacaa
aatagagctccagcttccaatgaagtggaaggaagtacagctagtggtgctagtcatcgg
gccccgccaaaaggtacagctagcaatgaagaacatgctacaagacctggaaccttgaaa
tcttcatcatctagaccagcttctgagcattcagatgttgacaatggtgatggacccccc
agaaccacccaaagtcgaaataatgactgcagaagtacagaaacgaataatgcttctgac
caaaatgtggatgttgaatgcaaagataatcagcaccccagaccaatgtcatcccaccag
gaaaaaggaggacaatctctaaatgcatcaaaatttgcatcagatggatgtggtgaaggt
caagataataatgggacatgcgaaacaagagaagccggggaattgcaggacaaacaattt
gatcgaagtgtggagaatagaacaggtgcacttggccagtcacctcaggatgttataaaa
aagattgacagaaacaaggtgaaggcagcgctggagaaacgtaggaagtctcagggtgat
atggctcgaaagaaagatttgatggatgaagatgatctcattgagagggaactggaagat
ggtattgaacttgctgctgggagtcaaagccggtctaagccctcaaatggaccagaacat
gagaacatacatgacggaaaacatcaagacagtgttgggtatggtggaactgatataaat
actgtggaagaaggtgaggtatctgcacatgatgatggtggccagggataccaatcaccc
aaacgcaaggcagaaagcccgaacctcgatgctgtagagaagaagcagcgtcgtgattat
gagcctggaacctcccaccataatgggtttgattatggagaagatcatggcaggagggtt
ggacactcagaaagggatcagaaaaggcaagcacaggagaatcatgtttga

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