Rosa chinensis (China rose): 112164482
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Entry
112164482 CDS
T06020
Name
(RefSeq) cyclin-T1-4 isoform X1
KO
K15188
cyclin T
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112164482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcn03021
]
112164482
Transcription machinery [BR:
rcn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
112164482
Brd4/P-TEFb complex
112164482
7SK RNP complex
112164482
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_N
CycT2-like_C
Cyclin_C
TFIIB
MRP-S34
Cyclin_C_2
Motif
Other DBs
NCBI-GeneID:
112164482
NCBI-ProteinID:
XP_024156456
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All DBs
Position
5:20162282..20168129
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AA seq
596 aa
AA seq
DB search
MAGFLPAESSHSGITGMYDGGSSNAQERLEEGSCWYFYRKEIEENSPSRLDGIDLKKETY
LRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHARNDRRTIATVCMFLAGKVEE
TPRPLKDVIIVSYEIIHKKDPAAVQKIKQKEVYEQQKELILSGERVVLATLGFDLNLLHP
YKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLP
SDGEKVWWQEFDVTPRQLEGGCPHFNSVEVSNQMLELYEQNRAPASNEVEGSTASGASHR
APPKGTASNEEHATRPGTLKSSSSRPASEHSDVDNGDGPPRTTQSRNNDCRSTETNNASD
QNVDVECKDNQHPRPMSSHQEKGGQSLNASKFASDGCGEGQDNNGTCETREAGELQDKQF
DRSVENRTGALGQSPQDVIKKIDRNKVKAALEKRRKSQGDMARKKDLMDEDDLIERELED
GIELAAGSQSRSKPSNGPEHENIHDGKHQDSVGYGGTDINTVEEGEVSAHDDGGQGYQSP
KRKAESPNLDAVEKKQRRDYEPGTSHHNGFDYGEDHGRRVGHSERDQKRQAQENHV
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggctggttttttgccggctgagtcctctcatagtggaatcactggtatgtatgatggt
gggtcctctaatgctcaggagaggctggaggagggatcctgttggtacttttacagaaag
gaaattgaagaaaattctccatctagactagatggcattgacttgaagaaggagacatat
ctacgcaagtcatactgtacttttctacaagatttgggcatgagacttaaagtaccccag
gtaacaattgcaacagccataattttctgtcaccgattttttcttcgacaatcacatgca
agaaatgatagaaggactattgcaacagtttgtatgtttcttgctggcaaggttgaagaa
actccacggccactgaaagatgttatcatcgtttcttatgaaattatacataagaaggat
cctgcagcagttcagaagatcaagcaaaaggaggtatatgaacagcagaaagaactaatt
cttagtggagagagggttgttcttgcaactcttggttttgatcttaatttactgcatcct
tataaaccccttgttgaggcgataaagaaatttaaagtagctcaaaatgcccttgctcaa
gttgcatggaatttcgtcaatgatggacttcggacatctctttgcttgcaatttaaaccc
caccacattgcagctggtgccattttcctcgctgccaaattcctcaaagtaaagctcccg
tcagatggcgagaaggtctggtggcaagagtttgacgtcaccccacgccagttggagggt
gggtgtcctcattttaattcagtagaagttagcaatcaaatgttggaactttatgaacaa
aatagagctccagcttccaatgaagtggaaggaagtacagctagtggtgctagtcatcgg
gccccgccaaaaggtacagctagcaatgaagaacatgctacaagacctggaaccttgaaa
tcttcatcatctagaccagcttctgagcattcagatgttgacaatggtgatggacccccc
agaaccacccaaagtcgaaataatgactgcagaagtacagaaacgaataatgcttctgac
caaaatgtggatgttgaatgcaaagataatcagcaccccagaccaatgtcatcccaccag
gaaaaaggaggacaatctctaaatgcatcaaaatttgcatcagatggatgtggtgaaggt
caagataataatgggacatgcgaaacaagagaagccggggaattgcaggacaaacaattt
gatcgaagtgtggagaatagaacaggtgcacttggccagtcacctcaggatgttataaaa
aagattgacagaaacaaggtgaaggcagcgctggagaaacgtaggaagtctcagggtgat
atggctcgaaagaaagatttgatggatgaagatgatctcattgagagggaactggaagat
ggtattgaacttgctgctgggagtcaaagccggtctaagccctcaaatggaccagaacat
gagaacatacatgacggaaaacatcaagacagtgttgggtatggtggaactgatataaat
actgtggaagaaggtgaggtatctgcacatgatgatggtggccagggataccaatcaccc
aaacgcaaggcagaaagcccgaacctcgatgctgtagagaagaagcagcgtcgtgattat
gagcctggaacctcccaccataatgggtttgattatggagaagatcatggcaggagggtt
ggacactcagaaagggatcagaaaaggcaagcacaggagaatcatgtttga
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