Rosa chinensis (China rose): 112164635 Help Entry 112164635         CDS       T06020                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism rcn  Rosa chinensis (China rose) Pathway rcn03040   Spliceosome Brite KEGG Orthology (KO) [BR:rcn00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     112164635  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:rcn03019]     112164635    03041 Spliceosome [BR:rcn03041]     112164635 Messenger RNA biogenesis [BR:rcn03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      112164635 Spliceosome [BR:rcn03041]  Complex B   Other components    Prp19-related factors     112164635  Complex C     112164635 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf TPR_15 DUF5575_C Motif Other DBs NCBI-GeneID:  112164635 NCBI-ProteinID:  XP_024156669 LinkDB All DBs Position 5:4088795..4093619 Genome browser AA seq 918 aa AA seqDB search MAISQELYPSQDDLLYEEELLRNPYSLKLWWRYLIARSDAPFKKRRTIYERAVKALPGSY KLWYAYLRERLELVRNFPINHFEYETLNNTFERALVTMHKMPRIWILYLQSLTEQRLVTR TRRSFDRALCALPVQQHDRIWELYLVFVSQKGIPIQTSLRVYRRYLLYDPTHVEDFIAFL IESELWQEAAERLASVLNDDQFRSIKGKTKHRLWLELCDLLTKNATAVSGLNVDAIIRGG IKKFTDEVGRLWTSLADYYIKRSLFEKARDVFEEGMQTVVTVRDFSVIFDAYAQFEESML AIKMEALGSDEEDEEEGENGRMEDERSEEEEEDVRTNVDLSVAELERKILHGFWLHDEND VDLRLARLDHLMDRRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTQAVKTVD PMQAVGKPHTLWVAFAKLYETHGDIANARVIFDKAVQVNYKTVDNLASLWCEWAEMELRH KNFKRALELMSRATAEPSVEVKRRVAADGNPPVQMRLHKSLRLWTFYVDLEESLGTLEST RAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYEKGTQIFKYPHVKDIWITYLSK FVKRYGKNKLERARLLFEDAVKAAPADAKKPLYLQFAKLEEDYGLAKRAMKVYDEATKAV PNHEKLSMYEIYIARAAEIFGIPKTREIYEQAIESGLPDKDVKTMCLKYAELEKSLGEID RARGVYVFASQFSDPRSDAEFWNKWHEFEVQHGNEDTFREMLRIKRSVSASYSQTHFILP EYMMQKDQRLSIDEAKDKLKQAGVPEDEMAALERQLAPAISDTPSKDSNRKVGFVSAGIE SQTDGGIKVAANHEDIELPEESDSEDEANVEIAQKEVPAAVFGDLANKRKDSEDNEGGDK DGESRLGALERIKRLKKM NT seq 2757 nt NT seq  +upstreamnt  +downstreamnt atggctatctctcaagaactctacccctcccaagacgacctcctctacgaagaagagctt ctccgaaacccttacagcctcaagctctggtggcgctacctaatcgcccgatccgacgcg cccttcaagaagcgccgcaccatctacgagcgcgccgtcaaggccctccccggaagctac aagctctggtacgcctacctccgcgagcgcctcgagctcgtccgcaactttccgatcaac cacttcgagtacgaaaccctaaacaacaccttcgagagggcgttggtcacaatgcacaag atgccgcggatttggattctgtatttacagagcctgacggagcagagattggtcaccagg actcgccggagttttgaccgggcgctgtgtgctctgccggtgcagcagcacgaccggatt tgggagctgtatttggtgttcgtgagccagaaggggatccctatccagacctcgcttcgg gtctaccggaggtacttgctttatgatccgactcatgttgaggattttattgcgtttttg atagagtctgagctgtggcaagaggcggcggagcggctggcctcggtgcttaatgatgat cagtttaggtcaattaaggggaagaccaagcataggctgtggttggagttgtgtgatttg cttactaagaatgccacggcggtttcgggtttgaatgtggatgctatcattagaggtggg attaagaagtttacggatgaggtggggaggctgtggacgtcgttggcggattattatatt aagaggagtttgtttgagaaggctcgggatgtgtttgaggagggtatgcagacagtggtg actgtgagggatttcagtgtgattttcgatgcgtatgcgcagtttgaagagagtatgctt gcgattaagatggaggctttggggagtgatgaggaggatgaggaggaaggagagaatggg agaatggaagatgagagaagtgaagaggaggaggaagatgtccggaccaatgtagacttg tctgtcgctgagcttgagaggaaaatactccatgggttttggctacatgatgagaatgat gttgatttgaggttggctagattggaccatcttatggatagaagacccgaactggctaat agtgttcttttgagacaaaatccgcataatgtagagcaatggcaccggagagtgaagctg tttgaggggaatcctacaaagcagatacttacttacacccaggctgtgaagacagtggat ccaatgcaagcagtggggaagcctcatacgttgtgggttgcttttgctaagctgtatgaa acacatggagatattgcaaatgcaagagtaatttttgataaggccgtccaggtgaactac aagacagtggataatctggctagtctatggtgtgagtgggcagaaatggaattgcggcat aagaattttaaacgagccctggaactgatgagtagagctacagcagagccgtctgttgag gtcaaacgaagagttgctgctgatgggaatccaccagttcagatgaggctccataaatcc ttgaggctttggaccttttatgtggacttggaggagagcctgggtacactagagtctact cgggcagtgtatgagaggatattggatttgagaatagccacacctcaaataataattaac tatgcattgcttctggaagaacataaatactttgaagatgcattcaaagtctatgaaaag ggtactcaaatattcaagtacccgcatgtcaaagacatatggattacatatctctctaaa tttgtaaaaagatatgggaagaataagctcgaacgtgcaagactactctttgaggatgct gttaaagcggctcctgctgatgcgaagaaacctttgtatcttcaatttgcaaagctggag gaggattatggtctagcgaagcgggctatgaaggtctatgatgaagcaactaaggctgtt ccaaaccatgaaaagttgagcatgtatgaaatctatattgcccgtgcagctgagatattt gggatccccaaaacaagggagatatatgagcaagcaatagaatctggtctccctgacaaa gatgtgaagacaatgtgcctaaagtatgctgaactcgagaagagcttgggcgaaattgat cgtgctcggggagtttatgtatttgcatctcaattttcagatccacgatcggatgcagaa ttctggaacaaatggcacgagtttgaggtgcaacatgggaatgaagatacgttcagagaa atgcttcgaatcaaacggagtgtttctgcaagctatagccagacacactttattctacct gagtatatgatgcaaaaggaccagaggttgagcattgatgaggcaaaagacaaattgaaa caggctggagtccccgaagatgaaatggctgctcttgagaggcagttggctcctgcgatc agcgatacaccctctaaagacagcaacagaaaagtgggctttgtgagtgctggaatagaa tcacagactgatggagggataaaagttgctgcaaatcacgaagacattgaactaccagaa gaaagtgattctgaagatgaggcgaatgttgaaattgcacaaaaggaggtcccagctgct gtttttggagatttggctaacaagagaaaggattctgaagataatgagggcggagacaag gatggtgagagccgccttggtgctcttgagagaataaagaggctgaagaaaatgtga

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