Rosa chinensis (China rose): 112164647
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Entry
112164647 CDS
T06020
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112164647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcn03041
]
112164647
Spliceosome [BR:
rcn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
112164647
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
112164647
NCBI-ProteinID:
XP_024156681
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All DBs
Position
5:787597..792098
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AA seq
543 aa
AA seq
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MSSKREHEDNGGGGIEGEGSLLEAKRQKVSEEVSPDSSPPASLLPGFNYGDEDEEERRAP
VNGGGDGKELQAGKNGVRVEEEEEEDDGEQGLYQGHKSREIEVRRDCPYLDAVNRQVLDF
DFEKFCSLSLSNLNVYACLVCGKYYQGRGRKSHAYTHSLEAGHHVYINLRTEKVYCLPDG
YEISDPSLDDIRHVLNPRFTEEQVEQIDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNV
TIQSLMRVMPLRNFFLIPKNYQHCKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMK
ASKKRFRIGAQSDPVEFMSWMLNTLHADLKTKKNTSIIYDCFQGELEVVKETHKNTDGGT
EYKGLVTETYRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEIVRPR
IARTRYRVTRLPRYLILHMQRFTKNNFFVEKNPTLVNFPVKNLELRDYIPLPTPKENERL
RSKYDLIANIVHDGKPGEGSYRVFVQRKSEELWYEMQDLHVSETLPQMVALSEAYMQIYE
QQQ
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgaagagagagcatgaagataatggtggtgggggtattgaaggggaagggagt
ttattggaggcaaagaggcagaaagtgagtgaggaagtatcgccggactcttcgccgcct
gcctcccttcttcctggttttaattatggggacgaggatgaggaggagagaagggcacct
gttaatggagggggtgatggtaaggagctacaggctggaaaaaatggggttcgagttgaa
gaagaagaagaagaggatgatggtgaacaaggactttatcaaggacacaagagccgcgaa
attgaagttaggagggattgcccgtatcttgatgctgttaatcgccaggttttggatttt
gattttgagaagttttgctcgctttctctatcaaatttgaacgtgtatgcatgcttggtt
tgtgggaagtattaccaaggaagaggaaggaagtcccacgcatatactcatagccttgaa
gcaggacaccatgtgtatatcaatcttcgaacagagaaggtttattgccttcctgatgga
tatgaaattagtgacccatcattggatgacattcgacatgttctgaacccaaggtttact
gaggaacaggttgagcagattgacaaaaacaagcagtggtcaagggcccttgatggttct
gattaccttcctggaatggtggggctaaataacattaaggagactgattttgtgaatgtc
actattcaatccttaatgagagttatgcctttaagaaacttttttcttatcccaaagaac
tatcaacattgcaagtctccgcttgttcatcgatttggggagcttacaagaaagatatgg
catgcacgcaactttaaaggacaggtgagcccgcatgagttcctgcaggcagttatgaaa
gccagtaagaaacggtttcgaataggagctcagtctgaccctgttgagttcatgtcatgg
atgctcaatacacttcatgcagatcttaaaactaagaagaataccagcatcatttatgac
tgctttcagggggaactagaggttgtcaaggagacccacaagaatacagatggaggaact
gaatacaagggccttgtcacagaaacttacagaatgcctttcttaatgcttggattggat
ttgcccccaccacctctttttaaagatgtgatggagaaaaacatcataccacaggtcccg
ctgttcaacattttgaagaaatttgatggtgagactgttactgaaatcgtccggcctcgc
atagcaaggacgaggtatcgcgttactagattaccacggtatctaattctgcacatgcaa
cgattcacaaagaacaacttctttgtggagaagaatccgactctagtcaactttcctgtg
aagaacctggaattgagagattacattcctttgccaacccccaaggagaatgagagattg
cgttcaaagtatgatttgattgccaatattgttcatgatggtaaacctggtgaagggtcc
tacagagtatttgtacagcgaaagtcagaagaactatggtatgagatgcaggatcttcat
gtctcagaaacacttcctcagatggttgctctttccgaggcttatatgcagatatatgag
cagcaacagtaa
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