Rosa chinensis (China rose): 112164667
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Entry
112164667 CDS
T06020
Name
(RefSeq) farnesyl pyrophosphate synthase 1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00900
Terpenoid backbone biosynthesis
rcn01100
Metabolic pathways
rcn01110
Biosynthesis of secondary metabolites
Module
rcn_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
112164667
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rcn01006
]
112164667
Enzymes [BR:
rcn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
112164667
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
112164667
Prenyltransferases [BR:
rcn01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
112164667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Pfc11_Rna14-15-ID
Motif
Other DBs
NCBI-GeneID:
112164667
NCBI-ProteinID:
XP_024156720
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All DBs
Position
5:complement(195745..199288)
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AA seq
342 aa
AA seq
DB search
MADLKSKFLNVYSVLKSELLEDPAFEFTDASRQWVERMLDYNVPGGKLNRGLSVIDSYQL
LQQGRELTEDEIFQASALGWCIEWLQAFFLVLDDMMDGSHTRRGQPCWFRLPKVGLIAAN
DGVLLRNHIPRILKKHFRQKPYYVDLVDLFNEVEFQTASGQLIDLITTIDGEKDLSKYSL
SIHRRIVQYKTAYYSFYLSVACALLMSGEELDKHIDVKNLLVDMGIYFQVQDDYLDCFGD
PETIGKIGTDIEDFKCSWLVVKALELSNEEQKKILHENYGNPDPAKVAKVKALYKELDLQ
GVFAEYERQSYEKLISSIEAHPSKAVQEVLKSFLGKIYKRKK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcggatctcaagtcaaagttcctgaacgtctactctgttctgaaatcggagctcctg
gaagaccctgccttcgaattcactgacgcctctcgtcaatgggtcgaacggatgctggac
tacaatgtgcccggaggaaagctgaatcgcggactgtcggttattgacagctaccagttg
ttgcaacaaggaagggaactgactgaagatgaaatcttccaagccagcgctcttggttgg
tgcatcgaatggctccaagcattttttctggttctcgatgacatgatggatggctctcac
acacggcgtggccaaccttgctggtttagattgcccaaggttggtttgattgcagcaaat
gatggagttctacttagaaaccatattccaaggattctcaagaagcactttaggcaaaag
ccatattacgtggatcttgttgatttgttcaatgaggtggagtttcaaaccgcttcaggt
cagctgatagatttgatcactaccattgacggagaaaaagatctatccaaatactcattg
tcaattcaccgccgtattgttcagtacaagactgcctattactcattttacctttcagtt
gcatgtgcattgcttatgtcaggtgaggaactggacaagcatattgatgtaaagaatctt
cttgttgatatggggatctactttcaagtacaggatgattatttggattgttttggtgat
ccagaaacaattggaaagataggaacagatattgaagatttcaagtgctcttggttggtt
gtgaaagctttggaacttagcaatgaggaacagaagaaaatactacatgagaactatggc
aaccctgacccagcaaaggtcgccaaagtaaaggccctttacaaagaactcgatcttcag
ggtgtatttgcggagtatgagaggcaaagctatgagaaactgattagttccattgaagct
catcctagcaaagcagtgcaagaagtgttgaagtccttcttgggtaagatttacaagagg
aaaaagtag
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