Rosa chinensis (China rose): 112164866
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Entry
112164866 CDS
T06020
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog
KO
K20307
trafficking protein particle complex subunit 10
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112164866
Membrane trafficking [BR:
rcn04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
112164866
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
NTS_TR130
bL31_N
TPR_2
DUF5714
TPR_1
Motif
Other DBs
NCBI-GeneID:
112164866
NCBI-ProteinID:
XP_024156970
LinkDB
All DBs
Position
5:28891461..28907028
Genome browser
AA seq
1236 aa
AA seq
DB search
MANYLAQFQTIKNSLDHLVIAVEDVSDLWPTVKKGFEEHLPFKRACLNNKTRNPVFVENF
RAEFILTTDARLRSRFPQEQSLFWFREPYATAVLVTCEDLDEFKSILKPRLKLIVQNDER
EWFIVFVSKAHPNNDQATKLANKVYAKLEVDFSSKKRERCCKFDLYSAEETFWEDLESKI
MECIRNTLDRRAQFYEDEIRKLSEQRFMPVWNFCNFFILKESLAFMFEMAHLYEDSLREY
DELEICYLETVEMTGKRRDFGGVDHGDDQASLLNSGNKPLTQIVQDDSFREFEFRQYLFA
CQSKLLFKLNRPYEVASRGYSFIISFSKALAVHENSLPFCMREVWVITACMSVVHATASH
YKEGLAAADIEKEFYRLQGDLYSLCRVKFMRLAYLIGYGTNMERSPGNSASLSMLPWPKP
AIWPSVPPDASSEVLAKEKIILQATPATKHFGIQRKPLPLEPSVLLREANRRRASLSAGN
MFEMLDGRQALTDGSGSDASIKMPSLQKVQASVMSRTNSSPGMFEGSIDRPMRLAEIYVA
AEHALQSTISNTDLWKSLSSTEEFEQKYLELTKGAADNYHRSWWKRHGVVLDGEIAAVLF
KHGNFDLAAKSYEKVCALYAGEGWQDLLAEVLPNLAECQKTLNDQAGYLSSCVRLLSLDK
GLFLTKERQAFQAEVVHLAHAEMKQPVPLDVSSLITFSGNPGPPLELCDGDPGTLCVTFW
SGFPDDITLDSLNLTLNAIFNTDEVAKALWSSTAIVLKPGRNTVTLDLPPQKPGSYVLGV
LTGQIGQLRFRSHSFSKGGPEDSEDFMSYEKPPRPVLKVSKARPLVDLAAAISTALLINE
TQWVGIIVRPINYSLKGAALYVDTGPGLKIEESHFIEMESYSDESNSSVEQLALSGDRVE
FPDWASNLPSIVWIPIRAISETLARGSSSVAPQRQINLDGMRTIALKLEFGASHNQIFER
TLAVHFTDPFHVSTRVADKCNDGTLLLQVILHSEVKATLTIYDAWLDLQDGFVNTGQSDG
RPTSAYFPLVVSPNSRAGILFSICLGKTNSEDEAKVVQSDSILNIRYGISGDRTAGAHPP
VAFGPEGAGQDLIFRSALVLQRPVLDPVLAVGFLPLPSSGLRVGQLVTMKWRVERLKDFE
ENELSHNNDEVLYEVNANTESWMVAGRKRGHVSLSAKQGSRIEISILCVPLVAGYVRPPQ
LGLPNVDESNISCNPAGPHLVCVLPPTLSSSFCIPA
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggccaactatctcgctcaattccagaccatcaagaattcactcgatcatctcgttatt
gctgttgaagatgttagtgatttgtggcctactgtcaagaagggatttgaggagcacttg
cctttcaaaagagcttgtttaaataacaagacccgtaatcctgtgtttgtggagaatttc
cgtgctgaattcatattaacaacagatgcaagacttcgcagccgattcccacaggagcag
tcgttgttttggtttcgggagccatatgcaactgcagtcctcgtcacctgtgaggatctt
gatgaattcaagtccattctcaaaccacggctaaaactaattgtccaaaatgatgaacgg
gaatggtttattgtttttgtatccaaggcacatccaaacaatgatcaagccaccaaattg
gcaaataaagtatatgccaaacttgaagttgattttagctccaagaagagagaaaggtgc
tgcaaattcgacctatatagtgctgaagaaaccttttgggaagacttggaatccaagata
atggagtgcatcagaaatacattggatagacgtgcacagttttatgaggatgagatacgc
aagctcagtgaacaacgcttcatgccagtttggaatttctgcaacttttttattttgaag
gaaagcttggcttttatgtttgagatggctcatctttatgaagattcactacgtgaatat
gatgagctagaaatttgttatttggaaacagttgaaatgaccggaaaacggagggacttt
ggtggagttgaccacggtgatgatcaagcatcattgcttaattccggaaacaaaccattg
acacaaattgttcaagatgactcatttagggaattcgaatttagacagtatctgtttgcc
tgtcaatcaaagctattattcaagctgaatcgcccctatgaggttgcgtcaaggggatac
tcattcattataagcttttcaaaggcgctggctgtacatgagaatagcctacctttttgt
atgcgtgaagtttgggttataacagcttgcatgtccgtagtccatgcaactgcttcacat
tataaggaaggacttgcagcagctgatatagaaaaggagttctaccgccttcaaggtgat
ctttactcactatgcagggtcaagttcatgaggcttgcgtatttaattggatatggcaca
aatatggaaagaagtcctggaaacagtgcttcactcagcatgctaccttggcccaagcca
gcaatttggccttcagttccacctgatgcttcttctgaggtgctagcaaaagaaaagata
attctacaggcaactccagctaccaagcactttggtattcaaagaaaaccattgcctctt
gaaccttctgtactactgcgtgaggcgaatcggaggagagcttctctctctgctggaaat
atgtttgaaatgcttgatggtcgccaagctttgactgatggttcaggttcagatgcatca
attaagatgccctcattacaaaaagtacaagcaagtgttatgtcgcgtacaaactcttca
ccaggaatgtttgagggctcaattgatcggcccatgagacttgcagagatttatgttgca
gctgaacatgctctgcagagtacaatttctaatactgatctatggaagtctttgtcatct
acagaggagttcgagcaaaaatatttggagctgactaagggtgctgcggacaattaccat
cgatcctggtggaaaaggcatggagttgtccttgatggagaaatagcagcagtcttgttt
aagcatggaaactttgatctagctgcaaagtcatatgaaaaggtctgtgctctttatgcg
ggtgaaggatggcaagatttgttggcagaagtcctgcccaacttagcagagtgtcagaag
acactcaatgaccaagctggctatctatcttcttgcgtgaggcttctttcattggataaa
ggcttgtttttaaccaaagaacgtcaggcttttcaggctgaggttgttcatcttgcacat
gctgaaatgaagcaacctgtgccactggatgtttcatcattaattacattctctggtaat
cctgggcctccgttagaattatgtgatggggatcctggtaccctatgtgtgacattttgg
agtggctttcctgatgacataactcttgattccctaaatctcacattgaatgcaattttc
aatactgatgaggttgctaaggcactatggagctctactgctattgtattaaagcctggt
cggaataccgttactctagatttaccaccccaaaaaccaggttcatatgttttgggggtt
cttaccgggcagattgggcagttaagattcaggtctcatagcttttccaaaggaggccct
gaagacagcgaggattttatgagttatgaaaagcctcctaggccagttttaaaggtttcc
aaagcgcgacctcttgttgatcttgctgcagctatttcaactgccctgcttataaatgaa
actcaatgggttgggattatagtaaggcccattaactactccctcaaaggtgctgccttg
tatgttgatactggtcctggccttaaaattgaagagtcacatttcattgagatggagagc
tacagtgatgaatcaaatagttcggttgagcagttggctctttctggtgatagagtagag
tttccagattgggcaagtaatttgccatctattgtatggattccaattcgtgctatcagc
gaaacacttgcaagaggatcatcttcagtggctccccaaagacagatcaatttggatgga
atgaggacaatagcactaaaacttgaatttggagcatctcacaatcagatttttgagagg
accctagctgtgcattttaccgatcctttccatgtgagcacacgagttgcagataaatgc
aatgatggaactttgcttctacaggtgattttgcactctgaagtgaaagccacattgacg
atttatgatgcttggcttgatcttcaagatggatttgttaatactggacaaagtgatggg
agaccaacttctgcctactttccactcgttgtttctccaaattctagagcaggaatatta
ttcagtatatgcttagggaagacaaattctgaagatgaagctaaggttgttcaatcagat
agtatactaaatattagatatggaatttctggtgatagaacagctggagcgcacccacct
gtggcttttgggcctgagggtgctggacaggatctgattttcaggagtgctcttgttttg
caaaggcctgtgcttgatccagtcctggccgttggttttcttcctctcccttctagtggc
cttagggttggccagctagttaccatgaaatggagggttgaaagattaaaggattttgaa
gagaatgaactttcccataacaatgatgaggtgttatatgaagtcaatgcaaacactgaa
agttggatggttgctgggaggaaaagagggcatgtctctctctctgcaaagcaaggttca
aggatagagatttcaatactatgtgtgcctctggtggcgggatacgttcgcccccctcaa
cttggtttgccaaatgttgatgaatcaaatataagttgcaatcctgcagggcctcatttg
gtttgtgtcttgcctccaactttgagttcgtctttctgcattcctgcatga
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integrated database retrieval system
