Rosa chinensis (China rose): 112164870
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Entry
112164870 CDS
T06020
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112164870
04121 Ubiquitin system [BR:
rcn04121
]
112164870
Enzymes [BR:
rcn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112164870
Membrane trafficking [BR:
rcn04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112164870
Ubiquitin system [BR:
rcn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112164870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-C3HC4_3
Zf_IFT144_1st
zf-RING_UBOX
Zn_ribbon_IFT122
DUF3915
zf-HC5HC2H
HypA
zf-RING_5
RPA43_OB
zf-C2HC5
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
112164870
NCBI-ProteinID:
XP_024156975
LinkDB
All DBs
Position
5:complement(89662861..89665279)
Genome browser
AA seq
391 aa
AA seq
DB search
MEEEMAARYWCYRCSEMVNPVMGVEMKCPFCQSGFIEEMDGTTRDNQEPDSEFGPDRPLS
LWAPILMGMMNNNPRRRRRLRRQEFDEDDDEDNENDDAHGGETELDRELESIIRRRRRSS
SSILQLLRGIRAAGLASESENSESDRDRDRDRDRDRDRDRERERERLILINPFNQTIILH
GSYDSSQGQNNNHTAIGSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKEAVEALPTVT
IKENLQCSVCLDDFKIGVEAKEMPCKHKFHGDCILPWLELHSSCPVCRFQLPADEAKHDS
NNSRNSSNQRDSENTGVAGEEGDEDGDGDGDGDGDGIAIGRNGSGRRFQFPWPFNLFSST
ESQSSGSGGNSSSSANATGSGSGSGSQTDDN
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaaatggcagctaggtactggtgctacaggtgttctgaaatggtgaacccc
gtcatgggagttgaaatgaaatgcccattttgccagagcggatttattgaggaaatggat
ggcaccactagggacaatcaggaacccgactctgaatttggacccgatcgacctctctcc
ctctgggctccaatcttgatggggatgatgaacaacaatccccgtagacgacggagattg
agacgacaagagttcgatgaggatgatgatgaggataatgagaatgatgatgcccatggg
ggagagactgaactggacagagaacttgaatcaatcatccgaaggaggaggagaagctca
tcttccattcttcagctgcttcgaggcattcgagctgctggcttggcatctgaatcagag
aattctgagagtgatagggacagggaccgggacagggatagggatagggacagggacagg
gaaagggaaagggaacgcctaattcttatcaaccctttcaatcaaaccatcattcttcat
ggttcttacgattcaagtcagggtcaaaacaacaatcacactgctattggttcattaggt
gattattttattggccctggtctggacttattgctgcaacatttggcagagaatgatcct
aatagatatggaactcctccggcacaaaaggaggcagtggaagctctgcccactgtgaca
attaaggagaatttgcaatgttctgtgtgcttggatgattttaagattggtgttgaagca
aaagaaatgccatgcaagcataaatttcatggtgactgtattctgccatggctggagctt
catagttcctgcccagtttgcaggtttcagttgcctgctgatgaagccaaacatgattcc
aataattctagaaacagcagtaaccagagggatagtgagaacactggcgttgctggggaa
gagggagatgaggatggggatggggatggggatggggatggggatggtattgcgattggg
agaaatggaagtggcagaaggtttcaatttccgtggcctttcaatctgttttcatcgaca
gaatctcaatctagtggcagtgggggtaattcttcctcatcagcaaatgcaactggaagc
gggagtgggagtgggtctcaaacagatgacaattga
DBGET
integrated database retrieval system
