Rosa chinensis (China rose): 112164931
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Entry
112164931 CDS
T06020
Name
(RefSeq) uncharacterized protein LOC112164931
KO
K14315
nucleoporin NDC1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112164931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112164931
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112164931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
112164931
NCBI-ProteinID:
XP_024157058
LinkDB
All DBs
Position
5:10387180..10390903
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AA seq
534 aa
AA seq
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MPPAARPAPPDAVVRNRFLGFLIWQSIPSTLIFLLSALSPSKPPFPFAPWFFAVITFLSF
HLSQLLFSASLSLISSTHPHPLLSPLKLSLELIRFLFVPGGSDLTGSPGSRPRVRVTVRF
LAFLAAAAVSGSVAAVSVCGELGGGVWGIGRVGFRGFVMGLLYGLYYVYKRRWVLEFPII
QRPPFFSFKMGLPTAITRSLKLSGAAYLVSAILVVFLPHQFHNRVTIERLIAEQITFYIG
SFLVFLCWELSHHLHQVLNTKRCIFAPPKGSAAAETNPTEHLLAALEESTPNSLPQYLAY
LDLCMICENNVDTWRRAAFFEESGETYKRVVSVCLRPLEQLASKLGDGLESPVNGKSQIS
NQLLSPTDQRLDSKYSEPFDNFQLYAWCAWSAASLTARSNTEDRFGVAQRSGSNAAVIST
LISCLLAVETYMGKKTNVPAQFMGPASIKWATSSVGNVGVAKKRVGPIHPKAYALADVLK
NSIYHIVSACHDQMVSSAKTGVLEKYWVIEGKPPFGSHELLVQKLRLFLDFRAS
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgcctccggctgcacgtccagcgccgccggacgcggtggtccgcaaccgcttcttaggg
ttcctgatctggcaatccatcccctccaccctcattttcctcctctccgctctctctccc
tcaaaaccccctttcccattcgccccatggttcttcgccgtaattaccttcctgtccttc
cacctctcccagctcctcttctccgcctccctctctctcatctcctccacccacccccac
ccactgctctcgcctctcaagctctccctcgagctcatacgcttccttttcgttccgggc
ggctccgatttgaccgggtcgccgggttctcggccccgggtccgggtcaccgtccgcttc
ttggcgttcctggctgctgcggcggtgtccgggtccgttgcggcggtttcggtctgcggg
gagcttggtggtggggtttgggggattgggagagtagggtttaggggttttgtgatgggt
ttgctttatggcttgtattatgtgtataagcgcaggtgggtcttggagttccccattatt
cagcgtccgccattttttagcttcaagatgggtctccccacggctatcacacgatcctta
aagctgtccggtgcggcatacctagtctcagctattctggtggtgttccttccccatcag
tttcacaacagagttacaattgaaaggttgattgcggagcagattaccttctacattggg
agtttcttggtgtttctctgctgggaactaagtcaccatttacatcaggtgcttaatacc
aagagatgcatatttgcgccgcctaaaggatcagctgcagcagaaacaaatccaactgag
catcttcttgcagctttggaggagagcactcctaattctcttcctcagtatcttgcatat
cttgatctctgcatgatttgtgagaataatgttgatacttggcgacgagctgcctttttt
gaagaaagtggtgaaacttacaaaagggttgtatctgtatgcttgcggcctctggagcag
cttgcatcaaagctgggtgatggcttggaaagtcctgttaatggaaaatcccaaatatcc
aatcagttactgtcgccaactgaccagcgactagattcaaaatactctgaacccttcgac
aacttccagctatatgcatggtgtgcctggtcagctgcttcactgactgcacgctcaaat
acggaggacagatttggggttgcccagagatcgggtagtaatgctgctgtgatctcaaca
ctgatctcttgccttcttgctgttgaaacatacatgggaaagaagaccaatgttcctgca
cagtttatggggccagctagtatcaaatgggcaacctcgagtgtgggaaatgttggcgtg
gctaaaaagagagttggccctatccatcccaaagcatatgcccttgccgatgttctcaaa
aactcaatctaccatatcgtgtccgcatgccatgatcagatggtgagcagtgccaaaaca
ggcgtgcttgagaagtattgggtcatcgaaggcaagcctccttttgggtcacacgagctt
ctggtgcagaaattgcgtcttttcctagattttcgagctagctaa
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