Rosa chinensis (China rose): 112165103
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Entry
112165103 CDS
T06020
Name
(RefSeq) protein argonaute 4
KO
K11593
eukaryotic translation initiation factor 2C
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112165103
03036 Chromosome and associated proteins [BR:
rcn03036
]
112165103
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112165103
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112165103
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
112165103
microRNA pathway
RISC loading complex
112165103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
112165103
NCBI-ProteinID:
XP_024157286
LinkDB
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Position
5:complement(48030268..48038159)
Genome browser
AA seq
937 aa
AA seq
DB search
MDSFEPDGNAANGSNGENGANGENGANGNGEEHALPPPPPVIPPDVVPLRAQADITPEPL
KKKIVRLPIARRGLGTKGQKTPLLTNHFKVNVTNNNKEDHFFHYSVSVTYEDGRPLDGKG
AGRRIIDRVHQTYISELGGKDFAYDGEKSLFTVGSLPRNKLEFSVVLEDTPSNRNNGNCN
ADGDGSPNESDRKRLRRPGRSKTFNVEISYAAKIPMKAIGDALRGQESENSQEALRVLDI
ILRQHASKQGCLLVRQSFFHNDPKSFVDVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTM
IIQPGPVVDFLISNQNVRDPFSLDWTKAKRTLKNLRVKTSPTNLEYKITGLSERPCKEQM
FTLRNKNAKDGEDGEIEVTVYDYFVSHRNIQLRYSGDLPCINVGKPKRPTYIPLELCELV
SLQRYTKALSTLQRSSLVEKSRQKPQERMSILSNALKINNYDGEPMLRACGVSIGNSFTQ
VEGRVLPAPKLKVGNGDDFFPRNGRWNFNNKKLVKPTKIERWVVVNFSARCDLKALVRDL
IKCGDMKGIAIDPPFDVFEENPQSRRAPPLVRVERMFEDIQSKLPGQPQFILCLLPERKN
SALYGPWKRKNLAEYGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSLLAVEFSPSIPV
VSKAPTIILGMDVSHGSPGQSDIPSIAAVVSSRQWPLISRYRASVRTQSPKVEMIDSLFK
RVSDTEDEGIMRELLLDFYTSSNKRKPDQIIIFRDGVSESQFNQVLNIELDQIIEACKFL
DESWCPKFVVIIAQKNHHTKFFQPQSPDNVPPGTIIDNRICHPKNNDFYLCAQAGMIGTT
RPTHYHVLLDDVGFSADDLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMSQFVKFE
DASETSSSHGGLTSAGAVPVPQLPRLKENVANSMFFC
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggattcatttgagcccgatggaaatgcagcaaatggatcaaatggagagaacggggca
aacggagaaaacggggcaaatggaaacggggaagaacatgcattgccacccccaccccct
gttatcccaccagatgttgttccattgcgtgctcaagcagatattactcctgaaccttta
aagaagaagatcgtgcgcctaccaattgctaggcgaggccttggaacaaaagggcaaaag
actcctctgctgactaatcacttcaaagttaacgtcactaataataacaaagaagatcac
ttcttccattatagtgtttccgttacgtatgaagatggtcgtccccttgacggcaagggt
gctggaagaaggataattgacagagtccaccagacttatatctctgagttaggtgggaag
gactttgcttatgatggggagaagagtctctttactgttggttcgcttccacgcaacaaa
cttgaattttcagttgttctggaggatacaccatcaaacagaaataatggaaattgtaat
gccgatggtgatgggagtcctaatgaaagtgatcggaagaggctacggcgtccaggtcgt
tccaaaacgttcaatgttgaaattagctatgctgcaaaaattcccatgaaggcaattgga
gatgctctacgcggtcaggagtcagaaaactcccaagaggctctgagagtgctggatatc
atattaaggcaacatgcatctaagcaaggatgcctcctggttcgtcaatctttcttccat
aatgatccaaaaagttttgttgatgttggaggaggtgttctagggtgcagaggattccat
tcaagcttcagaaccacccagggtggcctgtcgttgaacattgatgtatcaactaccatg
ataatacagcctggaccagttgttgattttctaatttccaaccagaatgttagagatccc
ttttcacttgactggacaaaggctaagagaactctgaagaatttgagggttaaaacgagc
ccaaccaatctggaatacaagataactggattgagcgagcgaccatgcaaagagcaaatg
tttaccttgagaaacaaaaatgcaaaggatggggaggatggagaaattgaagtgactgtt
tatgactattttgttagtcatcgcaatatacagttgcgttattctggcgatctgccctgc
attaatgttggaaagccaaagcgtcctacttacattccccttgagctatgtgaattggtt
tcgttgcaacggtatacaaaagcactttcaactcttcaaagatcttcactggtggagaag
tcaaggcaaaagccacaggagaggatgagcattttgtctaatgctttgaaaatcaacaat
tatgatggtgaacctatgctacgtgcatgtggtgtatcaattggtaatagtttcactcaa
gtggaaggccgtgttttgcctgctccaaagttaaaagttggcaatggggatgatttcttc
cccagaaatgggcggtggaatttcaacaataagaaactcgtgaagcctactaagatagaa
cgatgggttgttgttaacttctccgcacgctgtgatctgaaagcccttgtccgtgatttg
attaaatgtggagatatgaagggaattgccatagaccctccatttgatgtttttgaagag
aatccacagtctcgacgtgccccacctctggttagggttgagagaatgtttgaggatatt
caatccaaacttcctggacaaccacagttcattctctgtttgcttccggagaggaaaaat
tctgctctatatggcccatggaagcggaagaatctggctgagtatggtattgtcacacag
tgcatagctcctaccagggtcaatgaccaatatcttacaaatgttctgctaaaaattaat
gctaagcttggtggattaaattccttgttggctgttgagttttctccttccattcctgtg
gtttccaaggctcctaccatcatcctagggatggatgtgtcgcatggctctcctggccag
tcggacataccatcaatagccgcggtagtcagctcgaggcagtggccactcatttcccgc
tatagggcatctgttcgaactcagtctccaaaggtcgaaatgattgattcactgttcaag
cgtgtttctgatacagaagatgaaggcattatgagagagctgcttttggacttctataca
agttcaaataagcgtaaaccggatcagataatcatattcagggatggtgtcagcgagtct
caattcaaccaagtcttgaacattgaactggatcaaatcattgaggcgtgcaagttcctt
gacgagagttggtgcccaaaatttgtggtgattatcgctcagaaaaaccaccatacaaaa
ttctttcagcctcagtcacctgataatgttccacctggtaccattattgacaacagaatt
tgtcatccaaagaacaatgatttttatctctgtgcacaggccggaatgataggtaccacg
agacctactcattatcatgttctgttggacgacgttgggttttcagctgatgatctgcag
gaactagtgcattctctatcctatgtgtaccagagaagtaccactgccatttctgtagtt
gctccgatttgctatgctcatctcgctgccactcaaatgagtcagtttgtgaaatttgaa
gatgcatctgagacttcatcaagccatggtgggctgacctctgctggagcagtgccagtc
ccgcagcttcccaggctgaaggagaacgtggccaattccatgtttttctgctga
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