KEGG   Rosa chinensis (China rose): 112165212
Entry
112165212         CDS       T06020                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1 isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112165212
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcn03019]
    112165212
   03041 Spliceosome [BR:rcn03041]
    112165212
Messenger RNA biogenesis [BR:rcn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     112165212
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     112165212
Spliceosome [BR:rcn03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    112165212
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 OB_RNB Ntox35 RRM_RdRP1_2
Other DBs
NCBI-GeneID: 112165212
NCBI-ProteinID: XP_024157432
LinkDB
Position
5:81877162..81879724
AA seq 354 aa
MGSKSHSGHPHSGDGASPGKIFIGGLAKDTTYATFTKHFGKYGEIVDSVIMKDRFTGTPR
GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFRTKKIFVGGIPSAVPE
EELKIFFSKYGEVVEHQIIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMEGTQVEI
KKAEPKKSSNPPPASAYGSNSRARSFNDGYGPYGSSYGGFDGGFGPGPYRTPGGLGGGRY
GGGYGYGYGSDSGEFGTGYGSFGSSSLGGYRGESSLGYTSRLGPYGGGFGGGYGASGLGG
YGRGGGEGYGSGSYGSSNYGGGYESGTGGTYGGAGGAYGRGGYSSSSRYHPYSR
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgggttcgaaatcgcacagcggtcatcctcactccggcgacggcgctagccctggaaag
atcttcattggtggattggcaaaagacaccacatatgctacatttacaaagcattttggg
aaatatggagaaatagtggactctgtgataatgaaagatcggttcaccggaactccaagg
ggctttgggtttattacctatgctgatccttccgttgttgacaaagttatcgaggacact
catgtgatcaatggaaagcaggttgagatcaagaggaccattcctaaaggccaagggcaa
tcaaaggactttaggactaagaagatatttgttggtggaattccatctgcagttcccgag
gaagagttgaaaattttcttctcgaagtatggagaggttgtggaacaccagatcatacgg
gatcatgaaaccaaccgttctcgaggctttggatttgtaatttttgacagtgaggaagtt
gtagatgaattgttatctaaaggaaacatgatagatatggagggtacccaggtggagatc
aagaaagctgaaccaaagaaatcctcaaatcccccacctgcttctgcatatggtagcaat
tctagggctcgttctttcaatgatggctatggtccatatggcagttcttatggtggtttt
gatggaggatttggccctggcccctataggacaccaggtggtcttggtggcggtagatat
ggcggtggttatggatatggttatggtagcgatagtggtgaatttggcactgggtatgga
agttttggcagcagtagcttaggtggctataggggtgaatcttcccttggttacactagt
cgcctgggcccctatggtggtggttttggtggtggttatggtgcaagtggtttaggtggc
tatggtcgaggtggtggtgaaggctatggaagtggaagttatggaagttcaaattatggt
ggtggatatgaatctggcaccggtggtacttatggtggagcaggtggagcgtatggaagg
gggggctatagtagcagtagtcggtaccatccatattcaagatag

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