Rosa chinensis (China rose): 112165242
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Entry
112165242 CDS
T06020
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112165242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcn03009
]
112165242
Ribosome biogenesis [BR:
rcn03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
112165242
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N2
UFD1_N1
CDC48_2
Motif
Other DBs
NCBI-GeneID:
112165242
NCBI-ProteinID:
XP_024157470
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All DBs
Position
5:71773784..71776572
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AA seq
333 aa
AA seq
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MNILAVQALSRVIVVTLSRSSTSNIWKRVIKTHDSIQYLFGFFFLPVIMPPSALDRLASM
HVDYPMLFELNNATAGRVTHCGVLEFVADEGLIYVPYWMMENMLLQEGDIVQVKNKSLVK
GTYVKLQPHTKDFLDISNPKAILETTLRSYSCLTTGDTIMVPYNNKKYYINIVEAKPSSA
ISIIETDCEVDFAPPLDYVEPEKPTPSTSSTLPKKRPQEAEEEPVQKVARFNPFTGSARR
LDGKPSTESVAPVSSPILKQHQLEGENGAKDSKPSTSASRQRSGKLVFGSNSNQPTKEAP
KAAPKKQESSEKAEEEKETKFQAFTGKKYSLKG
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcctcgcagttcaggctttgagcagagttatcgttgttaccctgtctcgttca
tcgacaagcaacatctggaaaagggtgataaaaacgcatgatagtatccaatacttgttt
ggtttctttttccttccagttataatgcctccctcagctctcgatcgcctcgcatctatg
cacgtggactaccctatgttgtttgaacttaacaatgctactgctggacgagttactcat
tgtggggtcttggaatttgttgctgatgagggcctcatatatgtaccatactggatgatg
gagaacatgctcctacaagagggagacattgttcaagtgaagaacaaaagcctggtaaag
ggaacctatgtgaagttgcagccccacaccaaggacttccttgatatttcaaaccccaaa
gccattttggagactacattgaggagctactcttgtttaaccactggtgacactatcatg
gttccttataacaataagaagtattacattaacatagttgaagcaaaaccctcatctgca
atcagtatcattgagacagactgtgaggttgattttgcccctcctcttgattacgtggaa
cctgaaaaaccaactccgtcaacgtcatctactttgccaaagaagagaccacaagaagct
gaagaagaaccagttcaaaaggttgcaagattcaatccatttacaggttcagcaaggcga
ttggatggaaagccttcgacggaatcagttgcaccagtttcctctcccatacttaagcag
caccaactggagggtgaaaacggagccaaggattccaagccatcaacttctgcttcacgc
caacgttctggaaagcttgtgtttggttcaaattccaaccagcccacaaaggaagcccca
aaagctgctccaaagaaacaagagtcatctgagaaggcagaagaggaaaaagagacaaag
ttccaagcattcacagggaagaagtattctctgaaagggtga
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