Rosa chinensis (China rose): 112165262
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Entry
112165262 CDS
T06020
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112165262
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcn04040
]
112165262
Ion channels [BR:
rcn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112165262
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Paralog
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
112165262
NCBI-ProteinID:
XP_024157503
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All DBs
Position
5:complement(15377419..15399749)
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AA seq
619 aa
AA seq
DB search
MEGSSTLCIYSGVEELLNTPGPCGCPSPLQRILFAPYWSMRRAYWSMSATTSMKLTVVLL
CIGVLLDPYFFYIPIIDETNMCLGVDKKLMTAALVSRSLTDIPLVIKFIIGPMSYWPQYV
SVYNDDSEALPNAQPSEGFKRKLKKFVKAITAVLLLIVTVISILPIPQVAIVLVFPNMEG
SRYFYKLAFLNALLLLQYMCRVYLIHQLIHHLQYFIRKGVTATFNFFLYILAGHVLGALW
YFYSIQQEISCWHQACPDTTSQCISTYRCDSSITYTSIAFRKESCPTNLPDITPFNFGIF
QDVIQSGNTRLKNFPTKYFYCFSWGLRNLSNFGTNLETSSSVWENCFALLISIIGLLLFL
YLIGNVQLYLQSNANQTTTFEQEEKDKKLLRHAYKLLQVERNIREWMARNRIPEEMIMTD
IMKNVKQKSEEHDYIYEEGDVNLKHITSNLPWYLRKRVQRHLCMDALHKVPMLENMEEKV
LKMICEYLRPMIYHKYQDIVEAGAPLDVMFLVIEGTVICTDYASTHAATQLQKGYFLGEE
LLTWASLSDPDRDRPTSTKNVCCETEVEAFILTIEDLMNLVSTSQFQRNLKHNYELHIQE
RKQLALAYLKTDEEIRKDV
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggagggttcatccaccttatgcatttattcaggagttgaggagctcctcaatactcca
gggccatgcggatgtccaagtccacttcagcgaatccttttcgccccatattggtccatg
agaagggcatattggtccatgagtgccacgacaagtatgaagctgacagttgtactttta
tgtattggagtgttattagatccttacttcttttacattccaatcatcgatgagacaaat
atgtgccttggagtagacaaaaagttaatgactgcggcgcttgtttctcgatcactaacg
gatatccccttggtgataaaatttattattggtccaatgagttattggcctcaatatgtt
tctgtctacaatgacgactccgaggctcttccaaatgcgcaaccttcagaaggttttaag
cgaaagttaaaaaagtttgtgaaggcaataacggcagttctgttgttgatagttaccgtt
atttccattctaccaatcccacaggtggcaatcgtgcttgtttttcccaatatggaaggc
tctagatatttctataaattagcgttcttaaacgctcttcttcttctccaatatatgtgt
agggtctatttgatccaccagttaattcatcatcttcagtatttcatcagaaaaggggtc
acagctacatttaattttttcctttacatcctggcgggtcatgtacttggagctctttgg
tatttttattctattcaacaagaaatatcttgttggcatcaagcatgtccggacacaaca
tctcaatgtatatctacttatcgttgtgatagctctattacttacacaagtatcgcattc
cgaaaggaatcatgtccaacaaatctaccagatattactccattcaattttggtatattt
caagatgtgattcaatcgggcaatacaagactgaaaaattttccaacaaaatatttttat
tgcttttcttggggcctcagaaatctaagtaactttggcacaaacttggaaacaagtagt
tccgtgtgggaaaactgctttgctcttcttatttctattatcggtttgctactgttctta
tatctcatcggaaatgtgcagctgtatttgcagtccaatgcgaaccagacaacaacgttt
gagcaagaggaaaaagacaaaaaactattaaggcacgcgtataaactacttcaggtagaa
cgaaatatacgtgagtggatggcaagaaatcgtatccctgaggaaatgatcatgacggat
atcatgaaaaacgtaaaacagaaatcggaagaacatgactatatttatgaagagggggat
gtaaacttgaaacatatcacgtcaaatctcccatggtacctcagaaaacgagtacagcgg
catctctgtatggatgcactccacaaagtacccatgcttgaaaatatggaggaaaaagtt
ttgaaaatgatatgcgagtatctcaggccaatgatctaccacaagtatcaggacatagtt
gaagctggagcaccgcttgacgtgatgtttttagttatagaaggtacagttatatgcacc
gactacgcctctacccatgctgcaacacaacttcagaaaggttattttttgggagaagaa
ctgttgacttgggcatcactgagtgatcctgatagagaccgtcctacctcgactaaaaat
gtatgttgtgaaaccgaagtagaagcctttattctgacgatcgaggacttgatgaatctg
gtcagcacaagccaattccagaggaatttgaagcataattatgaacttcacattcaagaa
agaaagcagttggcactagcttacctcaagaccgatgaggagatacgaaaggatgtctaa
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