Rosa chinensis (China rose): 112165304
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Entry
112165304 CDS
T06020
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 15
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rcn01002
]
112165304
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
112165304
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112165304
Peptidases and inhibitors [BR:
rcn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112165304
Ubiquitin system [BR:
rcn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112165304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
112165304
NCBI-ProteinID:
XP_024157563
LinkDB
All DBs
Position
5:21920882..21928115
Genome browser
AA seq
943 aa
AA seq
DB search
MLEPREADIPALFLVFVVLPLLAYVLLGKWSEASKKRERVSLLAQLASEEALRAEAMAVP
DVIPPVSSSKNNVHACARCSRPATTRCSRCKSVRYCSGKCQIMHWREVHRQTCLLLEPSS
ATSSPMAVSYGESFHNDSINSQYFGSAMEQILGEEAPAENMIYPPIYTGIPNKVQCASVD
PSHISMLEKRTVDKKVSRKSKTELLRKKDGVTFDPSEETFGDWTTQSTFSNVASREVSVE
HKPTNLDSVLSEAETLKKYHANISDAYINGQATSGYTVHENDKFQGQDGNIFESRSNSGL
TCASYSSKSGADLHEVGLDFVPEGGHSLQGEKTSNDEKAEFKCSEITAVKGSVKAKRAPY
SLGTKVPKLSKSTVKDSGKQYCSEIERQGQITDDSKVARMRETTPQGSNGMANIKIMKMM
GLKKPKNITRQDVPEVSGYRHKTKKVLFPYDEFVKYFQSEVFDLTPRGLLNCGNSCYANA
VLQCLTCTKPLIIYLLRRSHSRACCGKDWCLMCELEQHVMMLRESGGALSPRQILFHMRS
INCQIGDGSQEDAHEFLRLLVASMQSICLEGLGGETKVDPRLQETTFIQHTFGGHLRSKV
KCLGCHHESERYENIMDLTLEIYGWVESLEDALTQFTTPEDLDGENMYRCGRCAAYVRAR
KQLSIHEAPNILTIVLKRFQEGKYGKINKCITFPDMLDMIPFMTGTGDIPPLYLLYAVVV
HLDTQNASFSGHYVAYVKDMRGNWFRIDDTEVQPVSMSQVMMEGAYILFYMRSCPRPQRA
FGGKTIRQQVPNLENGSLPKAQRPKPSQSIPSSQYVSPEHLPNFIRPETASGFGFANSTC
NDILRSSNGNVFRTAETYVDPTSMEFSDATSSDWSLFTSSDEASFTTESTRDSFSTVDHA
DAGNMDPISSIFNVLYAPEYSRSSVACRKISNSRPHSSFVSQE
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagccaagggaagctgatatacctgccctgttcttggttttcgttgtgcttcct
ttgcttgcttatgttttacttggaaaatggagtgaggcatctaagaagagagagagggta
agtttgcttgctcaactcgcatcagaagaagctcttagagctgaagcaatggctgttcct
gacgttattcctccggtttcgtcttcaaagaataatgttcatgcatgtgctagatgctct
aggccagccacaacccgctgctctagatgcaaatctgtcagatattgttctgggaagtgt
caaataatgcattggagggaagttcacaggcaaacatgcctgctgttggaacctagtagt
gcaacctcatctcctatggctgtctcatatggagaatcttttcataatgacagcatcaat
tctcagtactttgggtctgctatggagcagattttgggagaggaagcaccagctgaaaat
atgatttatcctccaatttacactggtatcccgaataaggttcagtgcgcttcagttgac
ccctctcacatttccatgctggagaaaagaactgtggacaagaaggtttcccgaaaatcc
aaaaccgaactcttgaggaaaaaggatggagtaacatttgatccttctgaagaaacattt
ggtgattggactacccaatcaaccttttctaatgttgcatcaagagaggtttctgtggag
cataagccaacaaatcttgactctgtcctgtcagaggccgaaactcttaagaaataccat
gccaatatttctgatgcctatatcaatggacaagctacttcaggatatacagtgcatgag
aatgataagtttcaaggtcaagatggtaacatatttgaatcaagaagcaactctggatta
acatgcgcatcatattcttcaaaaagtggagcagatttgcatgaagtggggttggacttc
gttcccgagggaggacattcccttcaaggagaaaaaacttccaatgatgaaaaggcagag
ttcaaatgttctgaaattactgcggtaaagggaagtgtaaaggctaaaagagctccatat
tctcttgggacgaaggtgcctaaattgtcaaaatcaacagtcaaggactccgggaagcag
tattgctctgagatagagaggcagggacaaattactgatgattcaaaagtagctagaatg
agagagacgactccacagggaagcaacggaatggcaaacataaagattatgaagatgatg
ggtctaaagaagccaaaaaacattaccagacaggatgtccctgaagtcagtggttatcga
cacaaaactaagaaggtcttgtttccttatgacgagtttgttaagtactttcagagtgaa
gtctttgacttaacacctcggggccttttaaattgtgggaacagttgctatgcaaacgct
gtcttgcagtgcttaacctgcacgaagccactcattatctatttgcttcgcagatcacat
tcgagagcctgttgtggtaaagattggtgtctcatgtgtgaactagagcaacatgtgatg
atgttacgggaaagtgggggtgctctttctcctcgtcagattctttttcacatgaggagt
attaattgccaaatcggtgatggaagtcaggaagatgcgcatgaatttttaaggcttcta
gtagcgtcaatgcaatctatatgcttggaggggttgggtggtgaaaccaaggttgatccc
agattacaagaaacaacttttatacaacacacctttggtgggcatctcagatccaaggtc
aagtgtttgggatgtcatcatgagtctgaacgatatgaaaacatcatggatcttacatta
gaaatatatggttgggttgagtcacttgaagatgcgctgactcagtttacgacacctgaa
gatttggatggtgaaaacatgtatagatgtggaaggtgtgctgcatatgttcgagccagg
aagcaattgagcatacatgaggcaccaaatatcctgacaattgtcttgaagaggtttcag
gaaggaaaatatgggaaaataaacaagtgcatcacgtttccagacatgctggatatgatt
ccatttatgactggaacgggcgacattcctccactttacttgctctatgctgttgtggtg
catttggatacgcaaaatgcatctttctctggacattatgtggcatatgtgaaagatatg
cgaggcaactggttcaggatagatgacactgaggttcagcccgtgtccatgagccaggtt
atgatggaaggggcatatattttgttctatatgaggtcttgccctcgccctcaaagagca
tttggtggaaaaactatcaggcagcaagttccaaatcttgaaaatggttccttgcccaaa
gctcagaggccaaagccaagccaaagcatacccagcagccaatatgttagcccagagcat
ttacctaattttatcaggccagaaactgctagtggctttggctttgccaacagcacctgc
aatgacatccttaggagttctaatgggaatgttttccgaacggcggaaacatatgttgac
cccaccagcatggaattctctgatgctacatctagcgattggtccctttttacgagttct
gatgaggcttctttcacaactgagagcactagagactctttcagtactgttgatcatgct
gatgctggcaatatggatccaatctcatcaattttcaacgtcttgtatgcgccagaatat
tctcgcagttctgttgcctgtagaaagatttcaaatagtaggccacacagtagctttgtt
tctcaggagtag
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