Rosa chinensis (China rose): 112165363
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Entry
112165363 CDS
T06020
Name
(RefSeq) ruvB-like protein 1 isoform X1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112165363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcn03036
]
112165363
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rcn03037
]
112165363
Enzymes [BR:
rcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
112165363
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
112165363
Chromatin remodeling factors
SRCAP complex
112165363
INO80 complex
112165363
INO80 complex (yeast)
112165363
SWR1 complex
112165363
ASTRA complex
112165363
Cilium and associated proteins [BR:
rcn03037
]
Motile cilia and associated proteins
Dynein assembly factors
112165363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_5
AAA_19
AAA_16
AAA_18
Cdc6_lid
Mg_chelatase
bpMoxR
AAA_25
DnaB_C
TsaE
AAA_28
AAA_lid_2
AAA_7
Zeta_toxin
AAA_11
nSTAND3
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
112165363
NCBI-ProteinID:
XP_024157618
LinkDB
All DBs
Position
5:67406126..67411512
Genome browser
AA seq
458 aa
AA seq
DB search
MDKVKIEEVQSTTKKQRIATHTHIKGLGLEANGRAAAWAAGFVGQGEAREAAGLVVDMIR
QKKLAGKALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR
RAIGLRIKENKEVYEGEVTELTPEETESVTGGYGKSISHVIIGLKTVKGTKQLKLDPTIY
DALVKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQD
VTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAELVPG
VLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGTDMASPHGIPVDLLDRL
VIIRTQTYGPEEMIKILATRAQVEELVVDEESLAYLGEIGQRTSLRHAVQLLSPASIVAK
MNGRDNIRKEDLEEVATLYLDAKSSAKVLQEQQEKYIS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggtgaaaatagaagaggttcagtccactaccaagaagcagcgcatagctact
cacacccacatcaaaggccttggtcttgaggccaatggaagagcagcagcttgggctgct
ggctttgtgggtcagggggaggcaagagaagctgctggtcttgttgttgatatgatacgg
cagaagaagttggctggtaaggctcttctactggctggacctcctggaactggaaagaca
gcgttggctcttggaatatcccaggagcttgggagtaaggttccattctgcccaatggtt
gggtctgaagtatattcatcagaagttaagaaaacagaggttctaatggaaaattttaga
agggctattggtctacgtatcaaggaaaataaagaggtctatgaaggagaggtgacagaa
ctaacaccagaagaaacggagagtgttactggtggctatggtaaaagcattagccatgta
atcattgggttaaaaactgtcaaaggaaccaagcaattgaagttggaccccactatttat
gatgcattggttaaggaaaaggttgctgttggtgatgttatatatattgaagcaaacagt
ggggcagtaaaaagggtaggcagaagtgatgcatttgctacggaattcgatcttgaagca
gaagagtatgttccacttccaaaaggagaggttcacaaaaagaaggagattgtgcaggat
gtaactctgcacgatctagatgctgcgaatgctcgacctcaaggtgggcaagacatatta
tctctaatgggtcagatgatgaagccaagaaaaacagaaattacggacaaattgcgacaa
gaaataaacaaggttgttaacaggtatattgatgaaggtgtagcagagcttgttcctgga
gttctgttcattgatgaggtacatatgctggatatggagtgcttctcgtacttgaatcgt
gctttagagagctcgttatctccaatagtaatatttgccacaaatagaggaatttgcaac
gtgagagggactgatatggctagtcctcatggaatacctgttgatttgttggaccggttg
gtgattatccgaacacagacttatggtcctgaagagatgataaagatcttagcaacccgt
gcacaggtggaggaactggtagtagatgaggagagtttggcttaccttggagagatagga
cagcgaacgtctttaaggcatgcagttcagctcttatcccctgcgagcattgtggcaaaa
atgaatggcagagacaacatccgcaaggaggatttagaagaagtagctaccctatatctg
gatgcaaagtcttcagcaaaggttcttcaagagcagcaggaaaaatacatttcatga
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