KEGG   Rosa chinensis (China rose): 112165423
Entry
112165423         CDS       T06020                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X1
  KO
K15047  heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
rcn  Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rcn03041]
    112165423
   03400 DNA repair and recombination proteins [BR:rcn03400]
    112165423
Spliceosome [BR:rcn03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   hnRNP proteins
    112165423
DNA repair and recombination proteins [BR:rcn03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     112165423
SSDB
Motif
Pfam: AAA_33 SPRY KTI12 AAA_17 Zeta_toxin
Other DBs
NCBI-GeneID: 112165423
NCBI-ProteinID: XP_024157687
LinkDB
Position
5:complement(3923583..3926748)
AA seq 659 aa
MASTKREAPTEDEPEPSKKPRLQQRVVLNRVDCDLDFNIEGNGLRGSSLYEQGFAYCWSG
ARAHVGITGGKYCFGCKVTSFQPVEMEDTAPEQRNLCRVGISRGDDVVGGLGETKLSFGY
GGTGKFSNASRFSDYGEKFGLGDVIVCAVNLEEKPLACIGFSKNGKSLGTAMRFNAGDLG
LGVAEGEVKNLHWECGVFPHVLLKNVGVELMFSVEDGLVPEEGFNPWECALEDGNSVMGP
SVCEPKHCEVMMMVGLPASGKTTWAEKWVKEHPDKRYVVLGTNAVLDQMKVPGLLRKQNY
GERFERLMSRATEIFNTLLSRAATTPRNYILDQTNVYKKARKRKLSPFKLFKKIAVVVFP
SPEEMKARSMKRFREMGKEVPADAVNEMLANYVLPVSRDLPCSDELFDEVVFVELNREES
QRHLDEMKQELARKSNLKSNTSSPYSCGNSIQSYPCSPSYGVSPVRPYPTPSPQYQGVSA
VNTGNWNSSYSSVPPPYYQSHMPNQVNSYQTHQGAVPIGTAGPYQGNQPPPIPRAITTCS
GYSSSYNANPTSGTAPCNSYGAGYGAATNPYPSPAVQPSLVGGAMASFTGSAPGCYGGAG
YSSHAAPQAPRAPAFHPSPYPPAYGGSPYGTLPPRPQSGSFPANTPYPDGYTPPGSGYY
NT seq 1980 nt   +upstreamnt  +downstreamnt
atggcatcaaccaaacgcgaagctcccactgaagacgaaccagagccctcgaagaagccc
aggctccagcagcgcgtggttctcaatcgcgtcgattgcgacctagatttcaacattgaa
ggcaatgggcttcgaggttcttcgctctacgagcaaggatttgcgtattgctggtccggt
gctagagcccatgtgggaattactggcgggaaatactgtttcggctgcaaagtgacgtcg
tttcagcctgttgagatggaggacacggcgccggagcagcggaatctttgccgggttggg
atttccagaggggatgatgtggtgggaggccttggggagacaaagctgagttttgggtat
ggtgggacagggaagttttcgaatgcgagtaggttttcggactacggtgagaagtttggg
cttggggatgtgattgtttgtgctgtgaatcttgaagagaagccattggcttgcattggt
ttttcgaagaatgggaagagtttgggtacggcgatgaggttcaatgctggggatttgggt
cttggggtggcggagggtgaagtgaagaatttgcattgggaatgtggggtgttccctcat
gtgctgttgaaaaatgtgggggtggagttgatgtttagtgttgaagatggacttgttcct
gaagagggttttaatccttgggaatgtgctcttgaggatggaaattctgttatgggaccg
tctgtttgtgaaccgaagcattgtgaagtgatgatgatggtgggtttgcctgcctcgggc
aaaacaacttgggcagagaaatgggtgaaagagcaccctgacaaacgttatgttgtgctt
gggacgaatgcggttctagaccaaatgaaggtgccaggactcttgcggaagcagaattat
ggcgaacgatttgaacgtctgatgagtagagccactgaaatttttaatactcttttatcc
agagcagccaccactcctcgcaattacattcttgatcagacaaatgtatacaagaaggct
cgtaaacgtaaactttcgccattcaaactgttcaagaagattgctgttgtggtgtttcca
agccctgaagagatgaaggctcgttctatgaagagattcagagaaatgggaaaggaggta
cctgctgatgcggtgaatgaaatgttggccaattatgttttacctgtcagcagggatttg
ccttgttcagatgagctttttgatgaggttgtgtttgtagaactcaacagagaagaatca
cagagacatttggatgagatgaagcaggaacttgcacgtaaatctaatttgaaatcgaat
acatcttcaccatattcctgcggaaactcaattcagtcttatccttgttcaccaagttat
ggggtgagtcctgtgcggccatatcccactccttcaccacaatatcaaggagtttcagca
gtcaacactggaaattggaatagctcttactcatctgttcctccaccttactatcagtca
catatgcccaaccaagtgaattcatatcagacccatcagggagctgtgccaattgggact
gcaggaccatatcaaggcaatcaacctccacctatacctagagcaattaccacttgttct
ggctactccagcagttataatgccaatcctacaagtggcacagccccttgcaatagttac
ggagcaggttatggtgctgccactaacccctatcctagtccggcagttcaaccctctcta
gtaggaggtgcaatggcttcattcacaggcagtgcccccggatgttatggtggtgctggg
tactccagtcatgctgctcctcaggctccaagagcacctgcatttcatcctagtccttac
ccacctgcatatggaggttcaccatacggaactctgcctcctagacctcaatctggaagt
tttcctgcaaacacaccttatcctgacgggtacacccctcctggttccgggtactactga

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