Rosa chinensis (China rose): 112165487
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Entry
112165487 CDS
T06020
Name
(RefSeq) glucan endo-1,3-beta-glucosidase 4
KO
K19892
glucan endo-1,3-beta-glucosidase 4 [EC:
3.2.1.39
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00500
Starch and sucrose metabolism
rcn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
112165487
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rcn00537
]
112165487
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.39 glucan endo-1,3-beta-D-glucosidase
112165487
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rcn00537
]
Enzymes
112165487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_17
X8
Motif
Other DBs
NCBI-GeneID:
112165487
NCBI-ProteinID:
XP_024157778
LinkDB
All DBs
Position
5:complement(88817555..88821797)
Genome browser
AA seq
493 aa
AA seq
DB search
MMLERRIAGLLLLLVGMFTNGLGAFVGVNIGTDVSDIPAGTEIVAILIAHQITHVRLYDA
DAHMLRALSNSGIEVVVGITNEEVLGIGESPSVAAAWVNKNVAPYLPSTNITAIAVGSEV
LTQIPHASPVLVSAMNYIHKALVATNLNFQVKVSTPQSMDVIPKAFPPSTATFDPSWNST
VFQILQFLKNTNSYYMLNAYPYYGYTKGDGIFPIDYALFQPLPSVKQIVDPNTLSHYNSM
FDAMVDATYYSIEALNFTGISVVVTESGWPSLGGSNEPDANVENAQTYTNNLIRRVLNDS
GPPSKPTFPINTYIYELFNEDKRPGPVSEKNWGVLFTNGSTVYPLTWGTSTPTGNSSGLF
CVAQTDADPDKLQDGLNWACGQGQADCTPIQQGHGCFLPNTLVNHASYAYNDYYQRMQSV
GGTCDFDGTAKTTTVDPSYGSCKFASSNSSTTGALTPISATAPSSPVGGWSSNLKVSQLQ
YLIPAAFLPLLLF
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttgaaagacggattgcaggcctgctattgctcctagtcggcatgtttaccaat
ggattaggtgcattcgtaggggtaaacattggtactgatgtttcagacattccagctggg
actgaaatagttgcgatccttatagcccatcaaatcacacatgttcgcctttatgatgct
gatgctcacatgctgagagccctttcaaacagtggtattgaagtagtggtaggtattaca
aatgaggaggtcctagggattggagagtctccatcagtagcagcagcctgggttaataaa
aatgtcgcaccttacttaccttccaccaacattacagccattgctgttggcagtgaggtt
cttacccaaattcctcatgcttcgccagttttggtttctgctatgaattacattcacaaa
gccctggttgctacaaatttaaacttccaggtcaaagtttcaactccacaatccatggat
gtaatccctaaggctttccccccctccactgctacctttgatccatcatggaactctaca
gttttccaaatccttcagtttttgaaaaacacaaattcctattacatgttaaatgcatat
ccttattatggttacaccaagggtgatggaattttcccaattgattatgctctttttcaa
ccacttccttctgtcaagcagattgttgatccaaacactttatcccactataacagcatg
tttgatgctatggttgatgctacctattattctatagaggccctcaattttactgggatt
tctgttgttgttacggagagtggttggccatctttgggtggatccaatgaacctgatgcg
aatgtggaaaatgctcagacatacacaaacaacttgattcggcgagttttgaatgattca
ggtccaccaagcaagccaacttttcctatcaacacttacatttatgagttgttcaatgaa
gataagaggccagggccagtgtcagagaaaaattggggcgtgctcttcactaatgggtct
actgtttatcctttaacttggggtacttccactccaactggaaattcttcagggttgttc
tgtgtggcgcaaactgatgcagatcctgataagttgcaagatggcttaaactgggcttgt
gggcaaggccaagctgattgcactcccattcaacaagggcatgggtgttttcttcccaat
acacttgtaaatcatgcttcatatgcgtataatgattactatcaaagaatgcagagtgtc
ggtggaacatgcgactttgatggcacggctaagacaactactgttgatcccagttatgga
tcttgcaaatttgcaagttctaattcaagtacaaccggggcacttacaccaatctcggcg
actgcaccttcaagccctgttggaggctggagttcaaatctgaaagtctcccaactgcag
tatctcataccagccgcatttcttccattgttattgttttga
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