Rosa chinensis (China rose): 112165516
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Entry
112165516 CDS
T06020
Name
(RefSeq) notchless protein homolog
KO
K14855
ribosome assembly protein 4
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcn03009
]
112165516
Ribosome biogenesis [BR:
rcn03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
112165516
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_Aladin
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
ASA1
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_EIPR1
NLE
CFAP251_N
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_NOL10_N
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
eIF2A
WD40_RFWD3
Beta-prop_HPS5
WDR54
Beta-prop_SPT8
Tricorn_2nd
Beta-prop_WDR75_2nd
Beta-prop_NUP159_NUP214
PAC11
Tricorn_N
Ge1_WD40
PD40
RMC1_N
Cytochrom_D1
DUF6930
Methyltransf_15
Motif
Other DBs
NCBI-GeneID:
112165516
NCBI-ProteinID:
XP_024157864
LinkDB
All DBs
Position
1:4920701..4927816
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AA seq
474 aa
AA seq
DB search
MAMEDEAAEKNVMCLLTDPEDAPLGKSLYLPQHTGTQQLQQIVNQLLNNEDKVPYTFYIA
DKELNQSLGEYAEKNKISVEKVLKIVYQPQAVFRIRPVNRCSATIAGHSEAVLSVAFSPD
GRQLASGSGDTTVRLWDLNTQTPLHTCSGHKNWVLCIAWSADGKYLVSGSKSGELQCWDP
QTGKPAGNPLTGHKKWITGISWEPVHLSAPCRRFVSAGKDGDARIWDITLKKCVICLSGH
TLAITCVKWGGDGFIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYVLRTGA
YDHTGKQYSSPEEMKKVALERYNKMKGKAPERLVSGSDDFTMFLWEPFVSKQPKARMTGH
QQLVNHVYFSPDGQWIASASFDRSVRIWNGTTGKFFGVLRGHVGAVYQISWAADSRLLLS
ASKDSTLKVWDIKTMKLKQDLPGHADEVYAVDWSPDGEKVASGGKDRVLKLWMG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggccatggaagacgaagcagcggagaagaacgtgatgtgtcttctgacggacccagaa
gatgccccattaggaaagtctttgtatcttcctcaacacactggcacccagcaacttcaa
caaatcgtcaatcagcttctcaacaatgaggataaggtgccttatactttctatatagca
gataaggaacttaatcaatcgcttggcgaatatgcggagaagaataaaatttctgtggag
aaggtactcaaaatcgtttatcaaccacaagctgttttccgaattcgtccagtcaatcgt
tgctcggccacaattgctggtcactcagaagctgtactttcagttgcttttagtcctgat
ggtcgacagttggcgagtggttctggtgataccactgtccgactatgggaccttaatact
cagacacctttgcacacgtgttcaggacataagaattgggttctttgtattgcatggtct
gctgatggcaagtatcttgttagtgggagcaagtctggagaacttcaatgttgggatcca
cagacaggaaaaccagcaggcaatccacttactggccacaagaaatggattactggaatc
tcttgggaaccagtccaccttagtgctccatgtagacgctttgtaagtgctgggaaagat
ggtgatgcacgcatatgggacatcacgttgaagaaatgtgttatatgtcttagtggccac
acacttgcaataacttgtgtaaaatggggtggagatggttttatatatacaggttcccaa
gattgtacaattaaggtctgggagactacacaggggaagctgattcgtgagctaaagggt
catgggcactgggttaactctcttgcattgagtactgaatatgttcttcgcactggagct
tatgatcacactggcaagcaatattcatctcctgaggaaatgaaaaaggtagctttggaa
aggtataacaaaatgaaaggtaaagctcctgaacgattggtttctggatctgatgacttt
actatgtttctatgggagccttttgtcagcaaacaacccaaagctcgcatgacaggtcat
caacagcttgtaaaccatgtctacttttcacctgatgggcaatggatagcaagtgcctca
tttgataggtctgtcaggatatggaatggtactactgggaagttttttggagttctccgg
ggccatgttggtgctgtttaccagatcagctgggccgcagacagcaggctacttttaagt
gctagcaaagattcaactctgaaggtttgggatatcaagactatgaaattaaaacaagac
cttccaggtcatgcagatgaggtttatgctgttgattggagtccagatggtgaaaaggtt
gcttctggtggtaaggatagagttttgaagttatggatgggctaa
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integrated database retrieval system