Rosa chinensis (China rose): 112165538
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Entry
112165538 CDS
T06020
Name
(RefSeq) cyclic nucleotide-gated ion channel 1 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112165538
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcn04040
]
112165538
Ion channels [BR:
rcn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112165538
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
112165538
NCBI-ProteinID:
XP_024157853
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All DBs
Position
5:14205358..14219854
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AA seq
956 aa
AA seq
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MSAYWATYRFGQPRLSMAGIVLMIPKSYYIFSPGATAELHSYSLVPTSYPVQALILSVPS
SLGIVDGIERQDPVTRTPIRKAWATVSTLVVDICSEAPNLISNCLEMIMTWALIGILGPF
VFVAIKWKRVFILSCVAVSFDSLFLYIPIIDQENKCLDTDKTLRNVALVLRSLTDIAFIF
HIIALINDFMDEGPKWDDHASASRLPRKLKLVREVIAKKMPWLSIRIVVNFLAILPIPQV
AIVVGSFRLGGSKHFLKQTIINVFLVFQYFLRIFQMFLSIKKIGDTVGKLVKGSFYFLMY
IIAGCVFAAFWYFFSIQRETSCWDQACQTIAGCMPIYDCGHSTSLNSTFLNKLCPIESPN
ATPFDFGMFHDILKSGITESTNFFTKFFYSFWWGLKNLSNFGTNLETSSYIWENCFAILI
CVVGLLLFLFLIGSVQAYIEKWRIEKIEKSEKIRELRRTRIDTKYRDIEKWMSSHDIPPG
DMWFAVMTNIEEDYLVNHIDEDVDASFMFYCTYGFDLKSNPLGFVCVKALKKIPILRKLD
EQDLEVFISEPLLYYTTKKKRDDYIIRAGGGVDSMYLIIDGVIECKDAETMSTQIMRRYD
CCGEEVLRWAILNYKRSRSDRDPLPISTVDVKCQTKTEAFEFTADDLIEILEKLNNSELL
EALAHDSSTDQRIEDWLLRNGFPEDLKANIINFLDKNNRLVEENTDADVDVDFLFGILPN
NIKSSIKRHLGMNALKKVPMLQKMHEYVLEIICNHLEPVVYKKNSYVVRAGEPLGIMILI
LRGRIIFTDTTSSKAIATSSSEITETCDENVIEIESYYGEQLLRWASPNNISSSANPVIS
TRDVKCQTKVEALILKAEDLRSAVSKCGSQWNFNHSMNSQNFVGYGRSRVADTGASASTS
PNNEQAIQLHQGHDMLLEQLIMIRNDMSTQRRRLDEMATFLAKLGYTSASSPPPTP
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcttattgggcaacgtatcgattcggacagcctcggctgagcatggctggtatt
gtcctaatgatacctaagagctactatatattttcgccaggagcaacagcagaactccat
agttatagcctggttcctaccagttaccctgttcaagctttgattctcagtgttccatcg
tcactgggcattgtggatggtattgaaaggcaagatccagtcactcgaactccaattagg
aaagcatgggcaacagtttcaactctagttgtggacatatgttcagaagctcccaatcta
atttcgaattgtctcgaaatgattatgacatgggcattgatcggaattctaggtccattc
gtgttcgttgcaataaagtggaaaagggtattcatactatcatgtgttgcagtgtcattt
gattctttgttcctttacattcccatcatcgatcaggaaaacaagtgccttgacacggac
aagacgttgaggaatgtagcgcttgtcctcagatcacttacagacatcgctttcatattc
catattattgctctgatcaatgatttcatggacgagggccccaagtgggatgaccacgcg
tcagcgtcacgtttgccaagaaaactaaagcttgtgcgagaggtcatagctaagaagatg
ccgtggttatctatccgcatcgtagtcaactttctagctattcttcccatcccacaggtg
gcaatagtagttggctctttcagattgggaggctctaaacattttctcaaacaaacaatt
ataaacgtctttcttgtcttccaatatttcctgaggattttccaaatgttcttatccatt
aagaagatcggtgacacggttggaaaattggtcaaaggttcattctactttctcatgtac
atcattgctggctgtgtctttgcagccttttggtatttcttttctattcaacgagaaaca
tcctgttgggaccaagcatgtcaaacgattgcaggatgcatgcctatctatgattgcggt
catagtacttcattgaatagcacattcctaaacaaattatgccctatagaatctccaaat
gcaacgccctttgattttggaatgtttcatgatattcttaaatctggtattacagaatct
acaaattttttcacaaaattcttttactctttctggtggggcctcaaaaatttaagtaat
tttggcacaaatctggaaacaagcagctacatatgggaaaattgctttgcaattcttatt
tgtgttgtcggcttgctactatttttatttctcattggaagtgtacaggcatatatagaa
aagtggaggatcgagaagatagaaaagtctgagaagattagagaattaagacgaacgaga
attgatacgaagtatagagatatagaaaagtggatgtcaagtcatgatattcctcctggt
gatatgtggtttgctgtcatgacaaatattgaagaagattatctagtaaatcacattgat
gaagatgtggatgcttctttcatgttctattgtacttacggatttgatctcaaatcaaat
ccacttggttttgtttgcgtaaaagcattgaagaaaatacccattcttcgaaaattggat
gaacaagacttggaagtgtttatcagtgagccccttctatattatacgaccaagaaaaag
agagacgactacattattcgagcaggaggaggagttgatagtatgtacttgattatagat
ggcgtaattgaatgcaaggatgctgaaacaatgagcacccaaattatgcgtcgttacgat
tgttgtggagaagaagttctgcgttgggcaatattgaactataagcgctcgcgctctgat
cgcgatcctcttcctatttcaacagtagatgtcaaatgtcaaacgaaaacagaagctttt
gagttcactgctgatgacttgatcgaaattctcgagaagttaaacaattcagagctgttg
gaggcgttggcccacgatagcagcaccgatcaacggatcgaggactggctgttgagaaat
gggttccctgaggatctgaaggcaaacatcattaatttcctagacaaaaacaaccggcta
gtggaagaaaacacggatgctgatgttgatgtggattttctattcggcattcttccaaat
aatatcaaatcatccataaagcgccatctcggcatgaatgccctaaagaaagtacccatg
cttcaaaaaatgcatgaatacgtgttggaaataatctgcaaccatctcgagccagtggtc
tacaagaagaatagctatgttgttagagcgggagaaccactcggtatcatgatccttatt
ctgcgaggcagaattatcttcactgacacgactagcagcaaggccatagcaacaagttcc
tcagagatcactgagacatgtgatgaaaatgttattgagatagagagttattatggagaa
caacttctgagatgggcatcacccaacaacatttcttcatctgccaatcccgtcatctca
actagagatgtcaaatgtcaaacaaaagtggaagccttgattctcaaggcagaggacttg
agaagtgcagtctccaaatgcggatcacaatggaatttcaaccatagtatgaattctcag
aacttcgtcggctatggaagaagtagggtggctgatacaggtgcatccgcatccacgtcc
cctaataatgagcaggctatccagcttcatcagggtcatgacatgcttcttgagcagctg
attatgattcgcaatgatatgtctactcaaagacggagattagatgagatggctacattt
ttagccaaattgggatatacaagcgcatcttctcctcctccaacgccttga
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