Rosa chinensis (China rose): 112165862
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Entry
112165862 CDS
T06020
Name
(RefSeq) protein argonaute 5 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112165862
03036 Chromosome and associated proteins [BR:
rcn03036
]
112165862
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112165862
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112165862
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
112165862
microRNA pathway
RISC loading complex
112165862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoMid
ArgoL2
Motif
Other DBs
NCBI-GeneID:
112165862
NCBI-ProteinID:
XP_024158329
LinkDB
All DBs
Position
5:complement(59488881..59494282)
Genome browser
AA seq
984 aa
AA seq
DB search
MSGRGSRGRHYSGGRSNPSHGGGGRGSFSGGGSSGAAAPAPTQTRAYFPPAASSSSAPVA
SLSSEMEQKLTLETTTTAAVAAVPPASSKAVRFPQRPGFGTVGKKIQVRANHFLVQVADR
DLHHYDVTITPEVASKKIHREVMNQLVRLYSETHLGKRIPAYDGMKSLYTAGPLPFSSKE
FVVKLLPNDGRAAAAGSSTSSKRKDREFKVALTLANKPDLYQLQQFLHSQRVETPQEAIQ
VLDIVLRATPSEKYTVVGRSFFSTELGPKGSLGEGLEYWRGFYQSLRPTQLGLSLNIDVS
ARSFFEPILVTEFLAKHFYHTDRSKHLPDRDCIKVKKTLKRVKVEVRLRDWTKNEEVKRT
YTINGLSAEPLGQLRFTCEDENTSVVQYYRKKYKIDLKYVAWPAIQAGNDSKPVYLPMEL
CSIVAGQRYTKKLNKKQVTNLLKATCQRPRDRENNITQVYHHWLVFILTMKYFYLLCAHA
VTSIYGQMIREKTNNRDDKESLIRREFGLQVREEMSLVKARVLPSPLLKYHDSGREKSVY
PQMGQWNMTNKKMVNGGRLQVWAFVNFSRVSQDITFEFLGALVDVCNSKGMEFFPQPLLP
VQFSHPGQIERVLRDIHKLSAQQGRQLQLLIVILPDQSDSSYGKIKRTCETELGIVSQCL
EPQKIKRWNTQYLENLALKINVKVGGRNTVLNDAIYKKMPVVTDRLPTIIFGADVTHPAA
GDDSSPSIAAVVASTDWPEVTNYRAIVSAQHHRDEIIKDLYKSQISEKGLVHGGMIRELL
VAFYKQKRLKPSRIIFYRDGVSEGQFSQVLLHEVDAIRRACASLEDGYMPTVTFVVVQKR
HHTRLFPADHSNRGQMDRSGNIQPGTVVDTEICHPTEFDFYLNSHAGIQGTSRPAHYHVL
FDENRFTADGLQVLTNNLCYTYARCTRSVSIVPPAYYAHLVAFRARHYIEGDSSDGGSTT
GGGAQVFRALPEIKENVKEVMFYC
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgtccggacgcggcagccgaggcaggcattattccggcggtcgctctaatccctcgcac
ggcggaggcggcagaggaagtttcagcggcggaggaagttcaggcgccgcagctccggcg
ccgactcaaactcgagcttattttcctccggcggcctcgtcaagctcggctccggtggct
tcgctgagtagcgagatggagcagaagttgacactggagacgacgacgacggccgccgtg
gctgctgtgccgccggcgtcgtcgaaggcggtgaggtttccgcagaggccggggttcggg
acggtcggtaagaaaattcaagtcagagccaatcacttcctggtgcaggttgcagacaga
gacctccatcattacgatgttacgattaccccagaagtagcatcaaaaaagatccacagg
gaggtgatgaaccaactggttcgcttgtattccgagacgcatttaggcaagagaattcct
gcttatgatggcatgaagagcctctatacagcagggccattgccattttcctccaaggag
tttgttgtcaaattacttccaaatgatggtcgtgctgcagctgcagggtcttcaacttct
tcgaaaagaaaggatcgagagtttaaagtggctctcactttggctaataagccagacctt
tatcaactacaacagttcttgcacagccagcgtgttgaaacgccacaagaggcaatacaa
gtccttgatattgttcttagagctacaccatcggaaaagtacactgttgttgggaggtca
tttttctctactgagcttgggccaaaaggcagtctaggtgaaggtttggaatactggagg
gggttttaccaaagtctacgcccaacccagctaggactttcccttaatattgatgtgtca
gcaagatctttttttgaacccattttggtgactgagtttcttgctaaacatttttaccac
actgatcgttccaagcatttgcctgatcgtgattgtataaaggtgaagaaaaccttgaag
cgggtcaaggtagaagttcgtttaagggactggaccaaaaacgaagaagttaagagaact
tacacaatcaatggactatctgcagaaccattgggacagttaaggtttacttgtgaagat
gagaacacatcagttgtgcaatattatcgtaagaagtacaagattgatctcaaatatgta
gcttggccagccattcaagctggcaatgattcaaaacccgtttacttgcctatggagctt
tgctcaattgttgctggacagagatacacaaagaaactgaataaaaaacaagtcactaac
ttactaaaagcaacttgtcaacgtcctcgggacagggaaaataatataacacaggtatac
catcactggctggtttttattttgacaatgaaatatttctatcttctatgtgctcatgct
gttacatctatatatggacagatgatcagggagaaaaccaacaatagagacgataaagaa
tctcttataaggagggaatttggattacaagtgagagaggaaatgtcattggttaaagct
cgggttttaccatccccattgcttaaataccatgacagtggtcgtgaaaagagtgtttat
ccccagatggggcagtggaacatgacaaacaagaaaatggtcaatggaggtaggttgcaa
gtctgggcatttgtcaatttctccagagtgtcccaagatattacttttgagtttcttggg
gctttggttgatgtgtgcaacagtaaggggatggagttttttccccaacccttgcttcca
gtacagttttctcatcctggacaaattgagagggtactcagggatattcacaagttgtct
gctcagcaaggacgacaacttcagttattgattgtcattttgcctgatcaaagtgattca
tcttatgggaagatcaaacgaacctgtgaaacagaattaggaattgtgtctcagtgctta
gagccccagaaaataaaaaggtggaatacacaatatttggaaaatcttgcccttaagatc
aatgtgaaggttggtggaagaaacactgttttaaatgatgcaatttataagaagatgcct
gttgtgaccgatcgcttgcccacaattatatttggagcagatgttactcatccagcagcc
ggggatgacagtagcccatcaatagcagcagttgtcgcctcaacggattggccagaggtc
acaaactatagagcaattgtttcggcgcagcatcaccgtgatgaaataatcaaagatctc
tataaatcacaaatatctgagaagggtttggttcatggaggaatgataagggaacttctc
gttgccttctataaacaaaaaagattaaagccgtcgagaattatattctacagagatggg
gtcagtgaaggccagttcagtcaagttttgttacatgaggtggatgctataagaagggct
tgtgcctctttggaggatggatatatgccaacagtgacgtttgtggtggtacagaaaagg
catcatactcgccttttccctgctgatcatagcaatcgtggtcagatggacaggagtggc
aatattcaaccaggtactgttgttgacaccgagatttgccaccctacagaatttgacttt
tatctcaacagtcatgctggaatccagggaacgagccgtccagcacactaccatgttttg
tttgacgaaaacagattcactgccgatggtttgcaagttttaacaaacaatttatgctat
acgtacgcaaggtgcacccgatcggtttctatagtgccacctgcttactatgctcatctg
gtagcttttcgagcacggcattacattgagggtgactcatccgatggaggttctacaact
ggtgggggtgcacaggttttccgagcccttccggagatcaaagaaaatgtgaaagaagtg
atgttttattgctga
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integrated database retrieval system
