Rosa chinensis (China rose): 112165863
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Entry
112165863 CDS
T06020
Name
(RefSeq) protein argonaute 5
KO
K11593
eukaryotic translation initiation factor 2C
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112165863
03036 Chromosome and associated proteins [BR:
rcn03036
]
112165863
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112165863
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112165863
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
112165863
microRNA pathway
RISC loading complex
112165863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Piwi_N
Phage_tail_terminator_6
Motif
Other DBs
NCBI-GeneID:
112165863
NCBI-ProteinID:
XP_024158331
LinkDB
All DBs
Position
5:complement(59501849..59507874)
Genome browser
AA seq
982 aa
AA seq
DB search
MSNRGGSSGSRGGGGRGRGRGNPGGQARGSGYTPAPAPAPAPAPAPAPAPAYAPAPARAQ
PPAVASSSTVPAPARTHQPAVASSSRAPAPAPAPAPAPVSSAAAASLASEMEEKLALAPS
SSKAVRFPVRPGFGRAGQRVQVRANHFLVEIGERDLHHYDVSISPEVASKKINRDVINQL
VQMYSESHLGKRMPAYDGMKSIYTAGSLPFSSKEFVVKLPEREGRAGSASRRRDRDFKVC
IKLANKPDLYQLQQFLRGRLHETPQETIQVLDVVLRAAPSQKYCVVGRSFFSPDLGPRGD
LEFGLEYWRGFYQSLRPTQCGLSLNIDISARAFYDPILVTEFIKKHFGYRDLSRGLSDRD
CLKLKKNLKGVKVTMSCGGSRSYRITGVSVQPLSQLTFTVEDNQTRISVVQYYREKYNIS
LKQVALPALQSGNDSRPAYLPMELATIVPGQRYTKRLNEKQVTNVLRATCQRPRERESNI
LKMVMHNNYKGEDLVNKEFGMQVKEQMALVDARVLPPPMLKYHESGRETKDTPRMGAWNM
INKKMVNGAKVDFWAFVNFSRSREDFNYRFCEDLVYMCNSKGVEFHSEPLLPVQSAHPNQ
IERVLRDIHKQSVQRLNEMGQASKHLQLLIIILPDVKGSYGPIKRICETELGIVSQCCNP
KQAQKLSKQYLENLSLKINVKVGGRNTVLNDAIQRRIPLVSDRPTIILGADVTHPQAGED
SSPSIAAVVASMDWPEVSKYRGILSAQNHRQEIIQDLYKLTHDEKRGLVHSGMIRELFIA
FRRSTGQKPHRIIFYRDGVSEGQFSQVLLYEMDAIRKACASLEEGYMPPVTFVVVQKRHH
TRLFPADNQTDRSGNIQPGTVVDTKICHPTEFDFYLNSHAGIQGTSRPAHYHVLFDENNF
TADGLQILTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGDSSDGASSVGRGSGG
SAAQTQVLPNVHEYVKDVMFFC
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatcgcggcggttcatccggtagtcgcggcggcggaggccgcggccgcggaaga
ggaaatcccggcggtcaggccagaggctcaggctacactccggcgcccgcgcccgctccg
gcccctgctccagctcctgctcctgctccggcgtatgctccggcgccggctcgtgctcag
ccgcctgctgttgcctcgtcgagcacggtaccggcgccggctcgtactcatcagcctgct
gtggcctcgtcaagcagggctccggctccggctccggctccggcgccggcacctgtttca
tcggcggcggcggcttcgctggcgagtgagatggaagagaagcttgcattggctccgtcg
tcatccaaggccgtgaggttcccagtgaggccggggtttggtagagctggtcaaagagtc
caagtccgagccaatcattttctggtcgagattggggaaagagatctgcatcactatgat
gtatcaattagccctgaagttgcatcaaagaagataaacagagatgtaatcaaccagctg
gttcagatgtactctgagtctcacttgggaaagagaatgccagcatatgatggcatgaag
agtatctacactgctgggtcattgcccttctcttcaaaggagtttgtggtcaagctacct
gagagagaaggtcgagctggatctgcatcaagaaggagagatagagacttcaaggtctgt
atcaagttggcaaacaagcctgacctgtatcaactgcagcagttcttacgcggaagacta
catgaaactccacaagagaccatccaagtgcttgatgttgttcttagagctgcaccatca
cagaaatactgtgtggttggtaggtcattttttagccctgatctgggtcctcgaggtgac
cttgaatttggcttggaatactggagaggcttttaccaaagcctaaggccaacccagtgt
ggtctatccctaaatattgatatctcagcaagggctttttatgatccgattctggtgaca
gagtttattaagaaacattttgggtacagagatttatccaggggtctgtcggatcgtgat
tgtctgaagctgaagaaaaatctgaaaggagtcaaggtaactatgagctgtggaggcagc
agaagttatcgaattactggagtatctgtgcagcctctaagccagttaacgttcactgtt
gaggataatcaaaccagaatatcagtggttcagtattatcgtgagaagtacaacattagc
ctaaaacaggtggctttgcctgcccttcaatctggcaatgattccaggcctgcttatttg
cccatggagctcgctacaattgttcctgggcagagatacacgaaaagactcaatgaaaag
caagtgacaaacgtgctgagagcaacttgccaacggccccgggagagggaatccaatata
ctgaagatggtgatgcacaataattacaagggagaggatcttgtaaacaaagaatttgga
atgcaagtgaaagaacaaatggcactggtggatgctagagtattaccacctccaatgctt
aagtatcatgagagtggtcgtgaaacaaaggatactccgaggatgggtgcatggaacatg
atcaataagaaaatggttaatggtgccaaagtggatttctgggcttttgtcaatttctct
cgatcacgtgaagattttaactatcgcttttgtgaggatctcgtctatatgtgcaacagt
aaaggggtggagttccattccgagcctttacttcctgtacagtcagctcatcctaatcaa
attgagagggttctgagagatattcacaagcagtcagtccagagacttaatgagatggga
caagccagcaaacatcttcagttgttgattatcatcctgcctgatgtcaaaggatcttat
ggtcccattaaaagaatttgtgaaacagagcttggaattgtctcccagtgctgtaatcct
aagcaagcacaaaagcttagtaagcaataccttgaaaatctgtctcttaagattaatgtc
aaggttggtggtagaaacacagtcttaaatgatgccattcagaggaggattcctctcgtc
agtgatcgtcctacaatcatccttggagctgatgtcactcatccacaagctggggaagac
agtagcccatctatagcagcagtggttgcctcaatggactggccagaggtctccaagtat
agaggaatcctgtcagcacagaatcatcgtcaagaaatcatccaagatctttacaaatta
actcatgatgagaaaagagggctggttcattcaggaatgatcagagaacttttcattgca
ttccgaagatcgactggccaaaaaccgcacagaatcatcttctatagggatggggtgagt
gaagggcagtttagccaagttctgctctatgagatggatgcgatacggaaggcctgtgct
tctttggaggaggggtatatgccaccagttacttttgttgtggtgcagaaaaggcatcac
acacgccttttccctgctgacaaccagacagataggagtgggaatattcaaccaggtact
gtggtggataccaagatatgccatccaacagaatttgatttctatcttaatagccatgca
ggaattcagggaacaagtcgcccagctcattatcatgtcctgtttgatgagaacaacttc
actgctgatggcttgcagattctcaccaacaatctgtgctacacatatgcaaggtgcacc
cgctcagtttccatagtgcctcctgcctattatgcgcatctagctgcttttagagcacgc
tattacattgagggcgattcatcagatggtgcttcttcagttggcagaggcagcggtggc
agtgctgcacaaacccaggtccttccaaatgtgcacgagtatgtcaaggatgtgatgttt
ttctgctga
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