Rosa chinensis (China rose): 112166180 Help Entry 112166180         CDS       T06020                                  Name (RefSeq) THO complex subunit 3   KO K12880   THO complex subunit 3 Organism rcn  Rosa chinensis (China rose) Pathway rcn03013   Nucleocytoplasmic transport rcn03040   Spliceosome Brite KEGG Orthology (KO) [BR:rcn00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     112166180   09122 Translation    03013 Nucleocytoplasmic transport     112166180  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:rcn03019]     112166180    03041 Spliceosome [BR:rcn03041]     112166180 Messenger RNA biogenesis [BR:rcn03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      112166180 Spliceosome [BR:rcn03041]  Complex C   Other components    EJC/TREX     112166180  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     112166180 SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_EML_2 ANAPC4_WD40 EIF3I Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_WDR3_2nd Beta-prop_NOL10_N Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd DSE1_N eIF2A Beta-prop_TEP1_C Beta-prop_HPS5 WD40_RFWD3 NBCH_WD40 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Tricorn_2nd Beta-prop_IFT122_2nd Beta-prop_IFT80_2nd TP_0598_N WDR90_beta-prop_4th Beta-prop_DCAF12 B-prop_COPA_B_2nd Beta-prop_ELP1_1st PAC11 Beta-prop_ACSF4 TRM82_WD DUF7099 Beta-prop_WDR41 Beta-prop_VPS8 Beta-prop_WDR11_1st WD_LRWD1 Beta-prop_Nup120_160 PROPPIN PD40 Motif Other DBs NCBI-GeneID:  112166180 NCBI-ProteinID:  XP_024158723 LinkDB All DBs Position 5:80777517..80780628 Genome browser AA seq 313 aa AA seqDB search MEEAVPFKNLNSREYHGHEKKVHSVAWNCNGTKLASGSVDQTARIWHIEPHGHSKPKGVE LRGHTDSVDQLCWDPKHADLVATASGDKTVRLWDARTGKCAQLAELSGENINITYKPDGT HIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNTTSDIFFLTTGNGTVEVLSYPSL KPVDTLMAHTAGCYCIAIDPRGRYFAVGSADSLVSLWDISEMLCVRTFTKLESPVRTISF NHTGEYLACASEDWFIDISNVQTGRTVHQIPCRAAMNSVEWNPKSNLLAYAGDDKIKPPG EGIFRIFGFKSSS NT seq 942 nt NT seq  +upstreamnt  +downstreamnt atggaggaggccgtaccgttcaagaacctcaacagcagagagtaccacggccacgagaag aaggtgcactctgtggcttggaactgcaacggcacaaagctcgcatcgggttccgtggac caaaccgctcggatttggcacattgagcctcacggacatagtaagcctaaaggtgtggaa ttgagggggcacacggatagtgtggatcagctgtgttgggatcccaagcatgctgatttg gttgccactgcctccggtgacaaaaccgttcggctatgggatgcgcggactgggaagtgt gcgcagctagcggagcttagtggcgaaaacattaacattacatataagccggatgggacg cacattgctgttggtaatagggacgatgaactaacgattttggatgttcggaaatttaag ccaattcacaagaggaagttcaattatgaggttaatgaaattgcttggaacacaacaagt gatattttcttcttgacgactggaaatggcaccgttgaagtactatcatacccatctctt aaaccagtggacactctaatggctcatacagctggttgctattgcattgcaattgaccca cgtggaagatattttgctgttgggagtgccgattccctggtcagcttgtgggatatctca gagatgctctgtgtgcgaacatttacaaaacttgaatcgcctgtgagaacaataagcttc aaccatactggagagtatcttgcttgtgccagtgaagactggtttattgatatatcaaat gttcaaactgggcggacggtgcatcaaattccttgtagggctgccatgaacagtgtggag tggaatcctaaaagcaatctacttgcatatgctggggatgacaagatcaaaccccctggt gaaggtatctttaggatatttggcttcaaaagttcgagctaa

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