Rosa chinensis (China rose): 112166267
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Entry
112166267 CDS
T06020
Name
(RefSeq) protein FRIGIDA-ESSENTIAL 1 isoform X1
KO
K27809
protein FRIGIDA-ESSENTIAL 1
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcn03000
]
112166267
Transcription factors [BR:
rcn03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
112166267
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
Torus
zf_CCCH_4
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
112166267
NCBI-ProteinID:
XP_024158830
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Position
5:complement(5897836..5901668)
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AA seq
746 aa
AA seq
DB search
MSASDDAQFPALAQLSDDDDDDEDPEELEQVDQELEEERDEVDMDISNSPIQAHHRDDRR
EDIKFEGISGHSGPGSSTWGKSEARPPSNTIDMEESTSNSNFSGTSNEPLRLKSQKTFAG
AGECRSQEFAENDARILSGKKTSTHHTESHANVKNVINSEDEMKQVVQSTNDRKKMESRF
SRSAASEIGTHITSPLAETNDPNKRPAIVCDFYAKGWCIRGTSCRFIHTKDSPKNSHPQP
EGDVAAASCSREVKVDEGPRGIHERSRLPGFHDPLASSSGNGFPFSSHLGIPRHHQFQSV
QREESNVGDSADVQKLHLPKDDLAFPTSYKDVGKDGFNNSPNKKGRYSIGNTSSHSSSME
DLAGVWRQRVHSDHTSPLVSHSLNSSNTLIATGLFPSSRISTWNGFSLPASYSSLDANPL
GSKKLLDSNRDYHAYTRSSAFLKSSSPFTSSELNNFPPISISQHSAELKTKISSNNWEPS
VPFRPSFILPSDFLSFSAKQYDPLRGSIELPKLANNSFEAFYSEGATVGNRLHQKVLPET
VSGTLPPACDADTNSMSSHNTYNEKVLDNSCYTRDPNSPVTEAETVGTSVVYQNGTLTKD
ENPLGHSQVKGSTNPNKISIYGDSRQKSDGSSQQRDIKVDRFRENNEAEVEHLTDGDVQQ
ESKEMRQFRAALIELVKELLKPKWREGSLSKDAHNKIVKKAVDKILSAFQPQQIPPTIEA
VTQYLSACRPKISKLVEGYIERYGKS
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcctccgacgacgcccaatttccggcgctcgcgcagctctccgacgacgacgac
gacgacgaagaccccgaagaactcgaacaagtagaccaagaactggaagaagagagggat
gaagttgacatggatatctcaaattcaccaattcaagctcatcatagagatgatagacga
gaagatattaagtttgagggtattagcgggcactcgggaccaggctcttctacttggggg
aaatctgaagcaaggccaccgtctaacacaattgatatggaagaaagtacgagtaattcc
aatttttctggtacttcaaatgagccattacgcttgaagtcccagaaaacttttgctggt
gctggagaatgtagaagccaagaatttgctgaaaatgatgctaggattctttctggaaag
aaaacctctacacaccatactgaatcacatgctaatgtcaagaatgttatcaattcagag
gatgagatgaaacaagtggtacagtctacgaatgatagaaagaaaatggaatcaaggttc
tccagatcagctgcttctgagatagggacacatataacatctcctcttgctgagactaat
gatccaaacaaacgcccagcaattgtctgcgacttttacgcaaaaggttggtgcattaga
ggtacttcatgtaggtttatccatacaaaagatagtccaaagaatagtcatccacaacct
gagggagatgttgctgctgcaagttgcagtagagaagtcaaggttgatgaaggtccaaga
ggcattcatgagagatcaagattgcctggttttcatgacccactggcttcttctagtgga
aatggttttccattttcctcacatctaggaatcccaagacaccatcagtttcaatcagtt
caacgtgaggaatcaaatgtgggtgattccgctgatgtccagaaattgcatttacccaaa
gatgatctagcatttcctacctcctataaggatgtaggaaaggatggttttaacaattca
cctaataaaaaaggcaggtactctataggaaatacctcttctcattcaagcagtatggag
gatttggctggagtttggagacaacgtgtgcacagtgatcatacttcaccacttgtgagc
cattccttgaatagctcaaatactcttatagctactggcttgttcccaagtagccgtatt
tcaacttggaatggattttcattgcccgcaagttattccagtttagatgcaaatcctctg
ggttctaaaaagctcttagacagcaatagggattatcatgcttatactagatcatctgcc
tttctgaaaagctcttctcccttcactagttctgaactgaacaactttcccccaatcagc
atttcacagcactctgctgaacttaaaacaaaaatttcttcaaacaattgggagccatcg
gtacccttccggccatcttttattcttccttctgattttctatcattttcagcaaagcag
tatgaccctcttcgcggtagcattgagttacccaagttagctaacaactcctttgaagct
ttctactctgaaggggcaactgttgggaatagactgcatcagaaagtacttcctgaaact
gtcagtgggactcttcccccagcttgcgatgctgatacaaactctatgtcttctcataat
acatataatgagaaggtattagataacagctgctatacacgtgaccctaattcacctgta
actgaagcagagacagtggggacttctgttgtctaccaaaatggaaccttgactaaggac
gagaatcccctgggccactctcaagtcaaaggtagtacaaatccaaacaaaatcagtatc
tatggtgattctagacaaaaaagtgatggttctagtcaacaaagggatataaaagtagat
agatttagagaaaacaatgaagcggaagttgaacatttaacagatggggatgtacaacaa
gagtcaaaagaaatgaggcaattccgggctgctcttatagaattagtgaaagagttgtta
aaaccaaaatggcgtgaaggtagtctcagcaaggatgcacacaacaagatagttaagaaa
gcagtagacaagattctcagtgcttttcagccccaacaaatcccacctaccatagaagca
gttacgcaatatctgtctgcttgccgtccaaaaatctcaaagcttgttgagggatatatt
gagagatatggcaagtcttga
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