Rosa chinensis (China rose): 112166484
Help
Entry
112166484 CDS
T06020
Name
(RefSeq) probable ribose-5-phosphate isomerase 4, chloroplastic isoform X1
KO
K01807
ribose 5-phosphate isomerase A [EC:
5.3.1.6
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00030
Pentose phosphate pathway
rcn00710
Carbon fixation by Calvin cycle
rcn01100
Metabolic pathways
rcn01110
Biosynthesis of secondary metabolites
rcn01200
Carbon metabolism
rcn01230
Biosynthesis of amino acids
Module
rcn_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
rcn_M00007
Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
rcn_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
112166484
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
112166484
Enzymes [BR:
rcn01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.6 ribose-5-phosphate isomerase
112166484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rib_5-P_isom_A
Motif
Other DBs
NCBI-GeneID:
112166484
NCBI-ProteinID:
XP_024159117
LinkDB
All DBs
Position
5:13031680..13055851
Genome browser
AA seq
304 aa
AA seq
DB search
MALAMAAIAIASPNPLHSSLTLSNARGRRAFCTRPRRRRRTHSLMKITGSSLADGSALFQ
AAHYTVDTYIKSGMVIGLGSGIASGMAMQYIGLQLGAGALKDIVGIPTSVASASEAAKAG
IPLGHHEDGSQIDFAFDDADIIEERTLIAVIGRTRSQGEESIIQEKTILNAANKVVFIVR
ENQYKCGMDGSIPVLVNPLNWMETAEEIDDLFLGDAEVWRRPSVGLAGPHGGQFPLVTRE
GHNVIDVIFTSPILSLAEVSMSLDNIDGVIEHGIISKFPCTAVIASESGPSVVDNVPKNS
VKEP
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggcactggcaatggcagccatagcaatagcttcaccaaatcccctgcattcatctcta
actttatcaaatgccaggggcagaagagccttctgcacaagaccaagaagaagaagaaga
acccattctctgatgaagattactgggtccagtcttgctgatggctctgctctttttcaa
gcagcccattacactgtggatacctacatcaaaagtggtatggtgattgggttggggtct
ggtatagcttctggtatggccatgcagtatataggtctgcaacttggagcaggtgcttta
aaggatatagtggggataccaacgtctgtagcatctgcaagtgaggcagcaaaggcagga
attccattgggtcaccatgaggatggttctcaaattgattttgcatttgatgatgctgat
attatagaagaaaggacacttattgctgtcattgggagaacaaggtcgcagggtgaggag
tcaatcatccaagagaagactatattaaacgcagccaataaagttgtcttcatagtcaga
gaaaaccagtataaatgtggtatggatggttctattccagttttggtgaatcctctcaac
tggatggaaactgctgaagagattgatgatctgtttttaggtgatgcagaggtatggagg
agaccctcagttgggctggcagggcctcatggtggtcagtttcctctagtcaccagagaa
ggccataacgttattgatgtcatatttacatctccaattctaagccttgctgaagtatca
atgagccttgataatattgatggagtcatagagcatggaatcatttccaagttcccatgt
actgcagtaattgcttcggaaagtgggccgtctgttgttgataatgtgccaaagaattca
gtaaaggaaccttaa
DBGET
integrated database retrieval system
