Rosa chinensis (China rose): 112166504
Help
Entry
112166504 CDS
T06020
Name
(RefSeq) (-)-alpha-pinene synthase isoform X1
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
112166504
Enzymes [BR:
rcn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
112166504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_synth
Terpene_syn_C_2
Motif
Other DBs
NCBI-GeneID:
112166504
NCBI-ProteinID:
XP_024159137
LinkDB
All DBs
Position
5:complement(39433520..39436323)
Genome browser
AA seq
570 aa
AA seq
DB search
MSMATDPSPSSQVPQIAKPVIVRQTANFQPSIWGDQFINYDSQDIKTEALWQQEVEGLKE
VVKREVFTNGKGDFSHELKLIDAIQRLGVAYHFEQEIEYALQHIHATYHDQDHYRENGDL
YTTALCFRLLRQHGYDISSDIFNKFKDANGNFKEGLVVDGSAMLSLYEAAHLKVHGEDIL
EEALVFTTTHLESAKSNACYGVQMTEQITQALARPLRKSLERICAKRHMSIYQHEDEASL
INHNEALLRLAKLDFNLVQSLHQKELCEITRWWKELDFERKLPFARDRKVELFFWIVGVY
FEPQYSIGRTIMTKVSILLTVLDDIYDAYGTFEELVIFTEAIDRWDVKCIDELPDYLKIF
YHELLNLFNDIDKVMSKEGKSYRVCYAIQAMKNQARSYFNEAQWLHEGRTPSIEEYMRVA
TVSISYTFLTTISLLGMGDIVTKDAFEWLLNDPKIVRASNIIFRLMDDIVSTKFEKEREH
APSSIDCYMKQYSVSEQETIDIFNKQIVESWKDINEEFLKPTAVPISVLMRVLNLTRVAD
LLYKGEDGFTRVGKMTKDSVAAVIIDPVPL
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtctatggctacagatccttccccatcaagtcaagtaccacaaattgctaagcctgta
attgttcgccagacagcgaattttcaaccaagcatttggggagatcagttcatcaactat
gattctcaagacattaagactgaggccctttggcaacaagaagtcgagggactgaaagaa
gtagtgaagagagaagtatttacaaatgggaaaggtgatttttcccatgaactcaagttg
atcgatgcaatccaacgccttggcgtggcataccattttgaacaagaaatagaatatgca
ctgcaacacatccatgctacatatcatgatcaggatcactaccgtgaaaatggcgatctt
tacactactgcgctatgttttcgattgctaaggcaacatggatatgatatctcatctgat
atattcaacaagttcaaagatgcaaatggtaacttcaaagaaggcttagttgtcgatggg
tcagctatgctgagcctctacgaagctgcacatcttaaggttcatggagaagatatacta
gaagaggctcttgttttcaccactactcacctcgagtccgcaaaatccaatgcgtgctat
ggagtacaaatgactgaacaaatcactcaagccttggcgagacctctgcgaaaaagtcta
gagaggatatgtgccaagcgtcacatgtcaatttaccaacatgaagatgaagcctcactc
atcaaccacaatgaagctttattgagacttgcaaagttggatttcaatcttgttcagtct
ttacaccaaaaagagttgtgcgaaattactaggtggtggaaagaactagactttgaaaga
aaattgccttttgcaagagacaggaaggtggagttgttcttttggatagtgggagtatat
tttgaaccccagtactctattggcagaaccattatgacaaaagtgtctatcctcctaact
gttttggatgatatatatgacgcatatggtacatttgaagaactcgtgatctttactgaa
gcaattgacaggtgggatgtcaaatgcatagatgaactcccggactatttgaaaatattc
tatcatgaacttttgaatcttttcaatgatattgacaaagtgatgtcaaaggaaggaaaa
tcttaccgagtttgctacgcaatacaagctatgaaaaatcaagctcgatcatatttcaac
gaggcccaatggttgcacgaaggacgcactccaagcattgaggagtatatgagggttgca
acagtttctattagttacacttttctaacaaccatttcattactcggcatgggagatatt
gtaacgaaggatgcatttgagtggttgttgaatgacccgaaaattgttagagcttccaat
atcatctttaggcttatggatgacattgtttccaccaagtttgagaaagagagagagcat
gcaccttctagcattgattgctatatgaagcaatatagtgtttcagagcaagagacaatt
gatattttcaacaaacaaattgtggaatcatggaaggatataaacgaggagtttcttaaa
ccaaccgccgtgccaatatcggttcttatgcgcgttctcaatttaacaagagttgcggat
ctcctttataagggagaagatggattcacacgggttgggaagatgaccaaagatagtgtt
gctgcagttattatcgatccagtgccactgtga
DBGET
integrated database retrieval system
