Rosa chinensis (China rose): 112166674
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Entry
112166674 CDS
T06020
Name
(RefSeq) disease resistance protein RPM1
KO
K13457
disease resistance protein RPM1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112166674
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
LRR_14
Rx_N
WH_DRP
LRR_8
LRR_4
AAA_22
AAA_16
AAA_14
NPHP3_N
OLD-like_TOPRIM_1
DO-GTPase2
AAA_7
Motif
Other DBs
NCBI-GeneID:
112166674
NCBI-ProteinID:
XP_024159320
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All DBs
Position
5:54669456..54673643
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AA seq
920 aa
AA seq
DB search
MALSVTDLLIGKLATILEYEGTTIAGVRHEVDKIKEEFLSMKAFLVDAEANKPKTEGQKL
WVARIRDLAYDVEDIIDEFMYHMYEKQTGGRLSRRLHKTIRTPCNLWFRHKIAKKLRKIT
DMIKAISERNKRYGVGLVGGATTSEDILKLVQSQAESSFFIMEDELVGIEGKKQILMGWL
MDDEQHQTVISVVGMGGAGKTTLVAKTFTNELVKRHFDCYAWITVSQTYDVVHLFRSLIR
ELYKSRKEDFPANLNAMSRIELLELLVNYLESKKYLVVLDDVWDIKIWREIKVSLQDRQL
GSRVVLTTRNEEVASNSFGVESYVHRIQPLQKNEVWELFSRKAFSTKQHKTCPTELKSLA
CQLVEKCEGLPLGIVALGGLMSSKKSLDQWQQVCNNLNWYLHNNSSLDPVRNILLLSYND
LPSQLKHCFLYCSLFPEDYLFKRKKLTRLWIAEGFVENVKGVMPEEVADGYVQELCFLSM
LQVADDFVSATSSGRLKKFKMHDLMRELALSTAEKEKFGYVYDGREVMEEISTRRLSIHR
MEGEIKSWRGMSKIRSLLVFATDMSSLSFLNTLVSRFKLLRTLDLEDVQIDNLPGAVVYL
FNLRYLNLKGTLIKELPESIRCLRNLQFLNIRDTEIQSLPEGVTRLLSLRNLIMYRYTGK
LYFKVVSGTKAPSNICKLQKLQSLSLIESEGDTCRLIGNMTQLKSIGISNVKERDEIDLW
LSIKKFTLLQRLALTASNEEEILPVKAQCPPLPHLRKLILVGRLQNVISWFSSLHSLTTL
FLHWSRLEEDLLPQIEALLNLKRLYLCNAYVGEELCFRRGFVKLVRLELLNFASVKKITI
ENGVMPNLRYLFVDSFMELKKVPLGLEYLSTLQYLGLKDVPMEVVRPIQKGGVDRSKVQH
IFEIIHVFEQSSKWVHENLA
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggccttgtctgtaacggacctcttaattggaaaacttgcgaccattcttgagtatgaa
ggaacaaccatagcaggtgttcgtcatgaagttgataagattaaggaggagtttctaagc
atgaaagctttcctagtggatgcggaggccaacaaaccaaaaactgaaggacagaaattg
tgggttgcaagaatcagagacttagcctatgatgttgaagatatcattgatgaattcatg
tatcacatgtatgagaagcaaactgggggtcgactttcaaggaggctacacaaaaccatt
cgcactccatgtaatctttggttcaggcataaaattgcaaagaagttgcggaaaattact
gacatgatcaaagccatttcagagaggaataaaagatacggtgttggccttgtaggagga
gcaactacatccgaagatattctgaaattggtgcagagccaagcggagtcttcgtttttc
attatggaagacgaactggttgggattgaaggcaagaagcaaatactaatgggatggcta
atggatgacgagcaacaccaaactgttatatctgtggtgggaatgggaggtgctggaaag
acaactctagttgccaagaccttcaccaatgaactggtaaagagacattttgattgttat
gcatggattactgtttcccaaacttatgatgtggtacacttgtttcgaagcttgatcagg
gaactctacaaatcaaggaaggaagatttccctgcaaatttgaatgccatgagccgcata
gaattgctagaattactagttaactacttggagtccaaaaaatacctagtggttctagat
gacgtgtgggatataaaaatatggagagaaataaaggtatcacttcaagatagacaactt
ggaagtcgagtcgtacttacaactcgaaatgaagaagtagcatccaactcttttggagtt
gaaagctatgttcaccgtattcagcccctgcaaaagaatgaggtttgggaactcttcagc
aggaaagcattctcaactaagcaacacaaaacttgtccaactgagctgaagtcattagct
tgccaacttgtagagaagtgtgaaggccttcctctcggtattgtggctttaggtggtctt
atgtcttctaagaagtcgctggatcaatggcaacaagtctgcaacaacttgaattggtat
ctacataacaattcatcgctagaccccgtgagaaacattttgttgctgagttataatgat
ttgccatctcaactgaagcattgcttcctctattgttccctttttcctgaagattatcta
tttaaaagaaaaaagctgactagattgtggatagcagaaggatttgttgaaaatgtgaaa
ggggtcatgcccgaagaagttgcagatggctatgttcaggaactctgcttccttagcatg
ttacaggttgcagatgactttgtttctgcaacatcttcgggaaggctgaaaaaatttaag
atgcatgatctgatgcgagagcttgctttgtcaacagctgaaaaagaaaagtttggttat
gtatacgacgggagagaagtaatggaggagatctcaacccgtcgcttatcaattcacaga
atggaaggagaaattaaatcatggcggggtatgtcaaagattcgttctcttcttgtattt
gccactgacatgtcctcattgtctttcttaaatacactggtttctcgattcaaattgttg
aggactctagacttggaggatgtccaaattgataatctgccgggtgcagttgtttacttg
ttcaacttgagatatttaaatttgaagggcactttaattaaggaacttccagagtccata
aggtgtctccgcaaccttcaatttctgaacatcagggatactgagatacagtcacttccc
gaaggagttacgaggttgctgagcttgcgcaatctaattatgtatcgctacactgggaag
ctgtacttcaaagttgtgagtgggacaaaagcgccatcaaatatttgtaagttgcagaaa
ttgcaaagtttatcactaattgaatcagaaggggacacttgtagacttatcggcaacatg
actcaacttaagagcatcggcatatcaaatgtgaaagaaagagatgagattgacctttgg
ctctcaattaagaagttcactctgcttcaacgtctagctttaacggcaagtaatgaagag
gaaatccttccggtgaaagcacaatgtccgcctcttccgcaccttcgaaagcttattttg
gttggcagactgcaaaacgtaatatcttggttttcttcactgcatagcctcacaactctg
tttctgcattggtcaagacttgaagaggatttactacctcaaattgaagcactgctcaat
ttgaaaaggctttatctttgtaatgcatatgttggggaagagttgtgtttccgtagaggc
tttgtaaagctggtgaggttggagttgttgaattttgcctcggtgaaaaagataactata
gaaaatggggtgatgccaaatcttcggtacttattcgttgacagcttcatggagttgaag
aaagtgccattaggacttgaatatctttctactctacaatatttgggcctaaaagatgtt
cccatggaagttgtaaggcccattcagaaaggaggtgtggatcgctctaaggtacaacac
atttttgagatcatacatgttttcgaacagtcatccaagtgggtccacgaaaacttggcc
tag
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