| Entry |
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| Name |
(RefSeq) DEAD-box ATP-dependent RNA helicase 20 isoform X1
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| KO |
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| Organism |
rcn Rosa chinensis (China rose)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:rcn00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112166821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:rcn03041]
112166821
03009 Ribosome biogenesis [BR:rcn03009]
112166821
Enzymes [BR:rcn01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112166821
Spliceosome [BR:rcn03041]
Complex A
U1 snRNP components
U1 related factors
112166821
Complex B
112166821
Ribosome biogenesis [BR:rcn03009]
Eukaryotic type
Pre-60S particles
Helicases
112166821
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
5:79415222..79422371
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| AA seq |
622 aa
MIPSAFEIGRARTSRFFPVFHTSTHSLTLTHSRRINPTPEKLPRQSKTMSYVPPHLRNST
STTTTTTTTATTRTSSGTDADRSKLSYSSSNFHSNNNDKSSAASFSSFSHSNGSRWSSAA
HSPANRAISPPDAVVPQWKPSERVLRMKPELIEEVCLRLNLDVSVSPDSAPPPAPIESFT
DMCLHPSIMKDIAFHGYTMPTPIQAQAMPVALSGRDLLGCAETGSGKTAAFAIPMIQHCL
AQPPVQRGDGPLALVLAPTRELAQQIEEEVKAFSKSLESFKTAIVVGGTNIAEQRSELRA
GVNIVVATPGRFIDHLQQGNTSVSRISFVVLDEADRMLDMGFEPQIREVMRNLSEKHQTL
LFSATMPEEIEGLAQEYLTNPVQVKVGKVSSPTANVTQSLEKVPDSEKTDRLLGLLVEES
SRAERAGHPFPLTIVFVERKTRCDDVAEALVAQGLHAVALHGGRTQTEREAALREFRKGT
TNILVATDVASRGLDVSGVAHVINLDLPKSMEDYVHRIGRTGRAGSMGQATSFYTDRDMF
LVANIKKAIADVGSGNALAFATGKTARRKEREAAAAHKQARVSLSKSSSMGPTSINIEDK
YKFMVSEPDNQTEGAADSAWDD |
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| NT seq |
1869 nt +upstreamnt +downstreamnt
atgatcccttcagcttttgagattggccgagcacgaacctctcgtttttttcctgtattt
cacacttcaactcattcactcactctcactcacagtcgccgcataaatccgactccggag
aaacttccccgtcaaagcaaaacgatgtcgtatgtgcctcctcacctgagaaactcaacc
tcaaccaccaccaccaccactaccaccgccaccaccagaacctcctccggaaccgacgct
gatcggagcaagctctcttactcctcctccaactttcactccaacaacaacgacaagtcg
tccgctgcttcattctcctcgttctcgcactccaatggctcccggtggagttccgccgct
cactcgccggccaaccgagctatctccccgcccgacgccgtcgtccctcagtggaagccg
tcggaacgggtcctccgaatgaagccggaactgattgaggaggtgtgtttgcggcttaat
ttggatgtttctgttagtccagactctgctcctcccccggcaccaattgagtcttttaca
gatatgtgtttgcaccctagcattatgaaggatatagcatttcatggatacactatgcca
acaccaattcaagctcaagccatgccagttgccctcagtggaagggatttattaggttgc
gctgaaactggtagtggtaaaacagctgcatttgccattcctatgatacagcattgtttg
gctcaacctcccgttcagcgtggtgatggaccactagcattggtactggccccaactaga
gagcttgcacaacaaatagaggaagaggtcaaggcttttagtaaatctctcgagtccttc
aaaactgcaatagttgtgggtgggaccaacatagctgagcagagatctgagcttcgagca
ggagttaatattgtggttgctactcctggaagattcatagatcatttacagcaagggaac
acttctgtgtctagaatttcgtttgttgttctagatgaagctgatagaatgcttgacatg
ggttttgaaccacagataagagaggtgatgcggaacctttctgaaaagcatcaaactttg
ctgtttagtgcaactatgcctgaagagattgaagggttagcccaggaatatttgactaat
ccagtgcaagtgaaggtgggaaaagtgagtagccctacagcaaatgtaactcagagtttg
gagaaggttcctgacagtgagaagactgatcggcttctgggtttgctcgtagaggagtca
tctcgagctgaaagagctggacatccatttcccttaactattgtatttgttgaaaggaag
acacgctgtgatgatgtagctgaagctttggtagcacaaggtttgcatgcagttgctctt
catggtggacgtactcaaactgaaagagaggctgctctgcgtgaatttagaaaaggcact
accaacatcttggttgccaccgatgttgcatctcgtggtttggacgtctcaggagttgct
cacgttatcaatttggatcttccgaagagcatggaagattatgtacaccggattggaagg
actggaagagcgggatcaatgggacaagctacttccttctacactgatcgtgatatgttc
cttgtggcgaatataaagaaagcaatagctgatgtgggatctgggaatgctctagctttt
gctacggggaagactgcaagaaggaaagaaagagaagcagctgctgctcacaagcaagct
agggtttctctatccaagtcttcaagtatggggcccacatcaataaacattgaggacaag
tataagttcatggtttctgaaccggacaatcaaacagagggtgcagcagatagtgcttgg
gacgactaa |
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