Rosa chinensis (China rose): 112166874
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Entry
112166874 CDS
T06020
Name
(RefSeq) protein LATERAL ROOT PRIMORDIUM 1
KO
K27807
short internodes/stylish family transcription factor
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcn03000
]
112166874
Transcription factors [BR:
rcn03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
112166874
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
112166874
NCBI-ProteinID:
XP_024159565
LinkDB
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Position
5:complement(51113653..51116419)
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AA seq
412 aa
AA seq
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MWSSSSGPSRPINYGFPPEMGMLGLRDVFLVAPAAAYHNHPHHHHHHHHPPHHQQDLLSS
DHNSMNGSNPATALGVGVGVIPLLTTTPCLGPSNTNMNDDNDDDDDHNMLSGRNRNSAGG
GGGSIHLWQQPTQQQHQLFLKKNQNLHGGAHLMVQGGGGGNFGASAASASASASSALTCQ
DCGNQAKKDCNHRRCRTCCKSRGFDCTTHVKSTWVPAARRRERQLMSEGVAAAGSSASTS
HTNNTSSNAKKPRLVTSQNTTPSHTNSTSNTTPPRSYDSTSKLQRQDGGFPETMPGQVRA
PAVFKCVRVTAVDDGAEDEYAYHAVVKINGHVFKGFLYDQGVEGQGRDHHGFPNISDLHL
GGRSGGATSTPTGRNGGAPILDPADAYAAAAAAASTSGGLLLGVSNFGNSIN
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcgtcatcatcaggcccttccaggcccatcaactacggcttcccaccggagatg
ggtatgctcggccttcgagacgtcttccttgttgctccagctgcagcctaccacaatcat
ccgcaccaccaccaccaccaccaccaccccccgcaccatcaacaagaccttctctcatct
gatcataattccatgaatggctctaatcccgccacagctctcggcgtcggcgtcggcgtc
attccactcctcaccaccaccccttgcctgggcccttccaataccaacatgaatgatgac
aatgatgatgatgatgatcacaacatgctgagcggtcgcaacagaaacagtgcaggtgga
ggaggaggaagtattcacttgtggcagcagccgacccagcaacaacaccaacttttcctc
aagaaaaaccagaaccttcacggtggcgcccatttgatggttcaaggtggtggtggtggg
aattttggtgcctcggcggcatcggcatcggcatcggcatcgtccgctctcacttgtcaa
gactgcgggaaccaggccaagaaagactgcaatcatcggcggtgcaggacatgctgcaag
agccgtggttttgattgtaccacgcacgtgaagagcacgtgggtcccagcggctagacgc
agggagcggcagctcatgtccgagggagtggcggcggccgggtcttctgcgtctacctcg
cacactaataatactagttccaatgccaaaaaaccaagactggttacttcgcaaaacaca
actccctctcatacgaactccacttcaaacactacgccacccagaagctatgacagtacc
tccaaactccaacgccaagatggtggttttccagagacaatgccgggccaagtacgggcg
ccagcggtttttaagtgcgttcgagtaacggccgtggatgatggtgcagaggatgagtat
gcctatcacgctgtcgtcaaaatcaacggtcatgtgtttaaggggttcttgtatgatcaa
ggggttgaaggtcaaggtagagatcatcatggcttcccaaatatttctgatttgcatttg
ggtggtagaagcggaggtgccactagtaccccaactggaagaaatggaggtgctccaata
ctcgaccccgcggatgcttatgcagccgctgcagcagcggcctccactagtggaggattg
ctgctgggagtgtcaaactttggtaactcaataaattaa
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