Rosa chinensis (China rose): 112166933
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Entry
112166933 CDS
T06020
Name
(RefSeq) solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isoform X1
KO
K14066
geranyl diphosphate synthase [EC:
2.5.1.1
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00900
Terpenoid backbone biosynthesis
rcn01100
Metabolic pathways
rcn01110
Biosynthesis of secondary metabolites
Module
rcn_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
112166933
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rcn01006
]
112166933
Enzymes [BR:
rcn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
112166933
Prenyltransferases [BR:
rcn01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
112166933
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
HEPPP_synt_1
Motif
Other DBs
NCBI-GeneID:
112166933
NCBI-ProteinID:
XP_024159637
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All DBs
Position
5:10217058..10223641
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AA seq
426 aa
AA seq
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MIYSRGFSRLPRNSFNGLCRCLLSNRPDPHQFFVSKAFSQSPGDSTQRILGCREFWPAFP
GSLISRHQIHHQSSSIVEEPQDPFLLVSDELSLIADRLRAMVVAKVPKLASAAEYFFKMG
VEGKRFRPTVLLLMSTALNVSIPEPPTRSESPMRLGDAFPTELRARQQCIAEVTEMIHVA
SLLHDDVLDDADTRRGVGSLNSVMGNKLAVLAGDFLLSRACVALASLRNTEVVSLLSTVV
EHLVTGETMQMTTAADQRCSMEYYIEKTYYKTASLISNSCKAIAILAGHTTEVAMMAYEY
GKNLGLAFQLIDDVLDFTGTSASLGKGSISDIRHGIITAPILFAMEEFPQLRAVVEQGFD
NPANIEIALDYLGKSNGIQRTRELARKHANLAAEAIESLPESEDEDVRRSRRALLDLTHL
VITRTK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgatatattcccggggattttctaggcttcctagaaatagcttcaatgggttatgtcgg
tgtttgctctctaatcgaccagacccacatcagttcttcgtctccaaagccttttctcag
tctccaggggattcgacccagaggattttgggttgcagagagttttggcctgctttccct
ggttctttaatttccaggcatcaaattcaccaccaaagtagctccatagttgaggaacca
caagacccattcttacttgtttctgatgagctatcacttattgctgaccggttacgagca
atggttgttgccaaggttcccaagctcgcctctgctgctgagtacttctttaaaatgggg
gtggaaggaaaaaggtttcgtccaacggtcttattattaatgtcaacagctctgaatgtc
agtatacctgaacctcctacacgatcagaatctcctatgcgattgggagatgctttccca
acggaattgcgtgcaagacagcaatgtatagcagaagtgacagagatgattcatgtggca
agcctcttacatgatgatgtattggatgatgcagacacaagacgcggcgttggttcatta
aattctgtgatgggaaataagctagctgtattagcaggagattttctactctctcgagct
tgtgttgcacttgcctctctaagaaacacagaggttgtatcattactatcaacagttgta
gagcatcttgtaacaggtgaaaccatgcaaatgactactgctgctgatcaacgttgtagc
atggagtattatatagaaaagacatattacaagactgcatcattgatttcaaatagttgc
aaggcaattgccattcttgctgggcatacaacagaagttgccatgatggcttatgagtat
ggaaagaatctgggtttggcattccagctgatagatgatgttcttgattttacgggcacg
tcagcatctcttggaaagggctctatatctgacatccgccatggcatcattactgctcca
atattgtttgccatggaagagttccctcagttgcgtgcagttgttgaacagggatttgac
aaccctgcaaatattgagattgcgcttgactaccttggcaagagtaatggaatacagagg
acaagagagctagcaagaaaacatgcaaaccttgctgcagaggccattgaatccctgccc
gagagtgaggacgaagatgttagaaggtcaaggagggcgcttctagatctcacccatcta
gtcattacaagaacgaagtaa
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