KEGG   Rosa chinensis (China rose): 112167066
Entry
112167066         CDS       T06020                                 
Name
(RefSeq) THO complex subunit 4A
  KO
K12881  THO complex subunit 4
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03013  Nucleocytoplasmic transport
rcn03015  mRNA surveillance pathway
rcn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112167066
  09122 Translation
   03013 Nucleocytoplasmic transport
    112167066
   03015 mRNA surveillance pathway
    112167066
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcn03019]
    112167066
   03041 Spliceosome [BR:rcn03041]
    112167066
Messenger RNA biogenesis [BR:rcn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     112167066
    TREX complex
     112167066
Spliceosome [BR:rcn03041]
 Complex C
  Other components
   EJC/TREX
    112167066
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    112167066
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 112167066
NCBI-ProteinID: XP_024159797
LinkDB
Position
5:69284808..69287840
AA seq 253 aa
MDHLNMSLDDIIKTSKKPGSGNSRGRARAASGPGPTRRLPNRAGNRATPYGAGAAKAPDS
TWQHDMFSDQGAAYAASAGRASAIETGTKLYISNLDYGVSNEDIKELFVEVGDLKRYGVH
YDRSGRSKGTADVVFSRRQDAVAAVKRYNNVMLDGKPMKIEIVGTNIATPGAPSAMPPAA
NGAFRNSNGGAPRGGQGRGGAFGRPRGGGGGGRGPRRGRGGRGRGGRSGEKVSAEDLDAE
LEKYHATAETMQE
NT seq 762 nt   +upstreamnt  +downstreamnt
atggatcatctaaacatgtccctcgacgacatcatcaagacctccaagaaacccggatcc
ggcaacagccgcggccgcgcccgggctgcctccggtcccggacccacccgccgcttgccc
aatcgcgccggaaatcgtgcgactccctatggcgccggcgccgccaaggcgccggattcc
acgtggcagcacgacatgttctcggatcagggagcggcctatgcagcttcggctggcaga
gcttccgccatcgaaactggaaccaagctctacatctctaatcttgactatggcgtttcc
aacgaggacatcaaggagctgtttgttgaggttggtgacctgaaacgttatggagtgcat
tatgatagaagtggcagatcaaagggaacagcagatgtagtcttttcacgaagacaggat
gctgtggcggctgttaaaagatacaacaatgtaatgcttgatgggaaaccgatgaagata
gagatcgtaggaacaaacattgcaacacctggtgcaccttccgctatgccacccgctgca
aatggcgctttcagaaattcaaatggtggagctccccgaggtggacagggtagaggtggc
gcatttggacgccctcgtggtgggggtgggggtggccgtggtcctagaaggggccgtggt
ggacgtggaagaggagggcgtagtggtgaaaaggtttctgctgaagatcttgatgctgag
ctggagaagtaccatgcaactgcagaaacaatgcaagagtag

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