Rosa chinensis (China rose): 112167066
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Entry
112167066 CDS
T06020
Name
(RefSeq) THO complex subunit 4A
KO
K12881
THO complex subunit 4
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03013
Nucleocytoplasmic transport
rcn03015
mRNA surveillance pathway
rcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112167066
09122 Translation
03013 Nucleocytoplasmic transport
112167066
03015 mRNA surveillance pathway
112167066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112167066
03041 Spliceosome [BR:
rcn03041
]
112167066
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112167066
TREX complex
112167066
Spliceosome [BR:
rcn03041
]
Complex C
Other components
EJC/TREX
112167066
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112167066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
112167066
NCBI-ProteinID:
XP_024159797
LinkDB
All DBs
Position
5:69284808..69287840
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AA seq
253 aa
AA seq
DB search
MDHLNMSLDDIIKTSKKPGSGNSRGRARAASGPGPTRRLPNRAGNRATPYGAGAAKAPDS
TWQHDMFSDQGAAYAASAGRASAIETGTKLYISNLDYGVSNEDIKELFVEVGDLKRYGVH
YDRSGRSKGTADVVFSRRQDAVAAVKRYNNVMLDGKPMKIEIVGTNIATPGAPSAMPPAA
NGAFRNSNGGAPRGGQGRGGAFGRPRGGGGGGRGPRRGRGGRGRGGRSGEKVSAEDLDAE
LEKYHATAETMQE
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggatcatctaaacatgtccctcgacgacatcatcaagacctccaagaaacccggatcc
ggcaacagccgcggccgcgcccgggctgcctccggtcccggacccacccgccgcttgccc
aatcgcgccggaaatcgtgcgactccctatggcgccggcgccgccaaggcgccggattcc
acgtggcagcacgacatgttctcggatcagggagcggcctatgcagcttcggctggcaga
gcttccgccatcgaaactggaaccaagctctacatctctaatcttgactatggcgtttcc
aacgaggacatcaaggagctgtttgttgaggttggtgacctgaaacgttatggagtgcat
tatgatagaagtggcagatcaaagggaacagcagatgtagtcttttcacgaagacaggat
gctgtggcggctgttaaaagatacaacaatgtaatgcttgatgggaaaccgatgaagata
gagatcgtaggaacaaacattgcaacacctggtgcaccttccgctatgccacccgctgca
aatggcgctttcagaaattcaaatggtggagctccccgaggtggacagggtagaggtggc
gcatttggacgccctcgtggtgggggtgggggtggccgtggtcctagaaggggccgtggt
ggacgtggaagaggagggcgtagtggtgaaaaggtttctgctgaagatcttgatgctgag
ctggagaagtaccatgcaactgcagaaacaatgcaagagtag
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