Rosa chinensis (China rose): 112167135
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Entry
112167135 CDS
T06020
Name
(RefSeq) auxin response factor 4 isoform X1
KO
K14486
auxin response factor
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112167135
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
112167135
NCBI-ProteinID:
XP_040362710
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Position
5:65124523..65130309
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AA seq
900 aa
AA seq
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MYCLNLSPPPNTQSPHFLSPSLLPLVVNSRSRKAIATLAIFAFCYPICNCLCLLLPLLTT
CKWVWRNPTLNSLILFDTLFFSFSTSTLFWLWLACEQFMEFDLNHAVVGDVVEKNAYCNG
DCDKGGCAHCLSSSTSSCSSNSSSVPVISSIYLELWHACAGPLISLPKKGNVVVYFPQGH
LEQVASSSPPFSSMERPHFDLQPQIFCKVVNVQLLANKENDEVYTHVTLLPQAESAGMNL
EGKELEELGVDEGDGGSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQ
RPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFISQKNLVSGDAVLFLRGENGEL
RLGIRRAVRPRNGLPDSVIGNQNSYSSVLSPVANAVSTKSMFHVFYSPRASHAEFVIPYQ
KYVRSIATPVTMGTRFKMRFDRDDSPERRCSGVVTGISDLDPYRWPKSKWRCLMVRWDDD
IGNDHQERVSLWEIDPSVSLPPLSIQSSPRLKKLRTSLQAFPPNHSIPAGSCGLMDFEET
VKSSKVLQGQENMGFISPHYGCDTLKSPVDFEMQPSAHQNLASHVSQKATIGEFMRAHHT
SYTGFAESDRFPKVLQGQEICPLRSLTGKANFNLGNWESNLGSTSFNSYQAPKPNMFTLG
SESLLNMYFPYGDIHKVGQDPMICSNTTNFPRESIKANPYSIQMGVTRNEVGRPKKPSEH
QPQESTSALPTLVTNIKSPKEVSADGTANGCKLFGFSLSGETPTLSQSSSKRSCTKVHKQ
GSLVGRAIDLSKLNGYGDLLSELERLFSMECLLRDPNKGWRILYTDSENDVMVVGDDPWH
EFCNVVSKIHIYTQEEVEKMTIGMISDDTQSCLEQAPPMLEVSKSSSVGQPDSSPTAIRV
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgtactgtcttaacctgtcccctccacccaacacacagtcccctcactttctctctcca
tctcttcttcctcttgtcgtaaacagtcgaagtcgaaaagccatcgccacattggctatt
tttgccttttgttatcctatatgcaattgtctgtgtctgctgctccctcttctcactacc
tgcaaatgggtgtggaggaatcctactttgaattccttgatattatttgatacccttttc
ttttccttctcaacttcaaccctcttctggttgtggcttgcttgtgaacaattcatggaa
tttgatctgaaccatgcagtagtgggtgatgtggtggagaagaatgcatattgtaatggg
gattgtgacaagggtggttgtgctcattgtttgtcctcttcaacttcttcttgttcttca
aattcatcatcagttcctgtgatttcttcaatctatttggagctttggcatgcttgtgct
ggtccactcatttcactacccaagaaaggaaatgtggttgtctacttcccacaaggtcac
ttggaacaagttgcctcatcatcccctcctttctcatccatggagaggcctcactttgat
ctccagccacagatcttctgcaaggttgtcaatgtccagctgcttgctaacaaggagaat
gatgaggtctatacacatgttactttgcttcctcaggcagagtcggcaggaatgaatttg
gaaggcaaagagcttgaagagttgggggtggatgagggggatgggggatcacctacaaaa
tcaacccctcacatgttttgcaaaacacttacagcttctgataccagtacccatggaggg
ttctctgttcctcgcagagctgcagaagactgtttccctcctctggattataagcagcaa
aggccctctcaagagcttgttgcaaaggacctacatggtgtagaatggaggtttcgacat
atttatagaggtcagccacggcggcatctgctcaccacagggtggagtatttttataagc
caaaagaatcttgtctcaggggatgctgtgctctttctgaggggtgaaaatggagagctt
aggttgggcattagaagagctgttcggcctagaaatggccttcctgattcagttatcggc
aaccagaattcttattctagtgttctttccccagtcgctaatgctgtatccaccaagagc
atgttccatgtattctacagtccaagggcaagccatgcggagtttgttattccctaccaa
aaatatgttagaagcattgctactccagtgaccatggggacaagattcaaaatgagattt
gatagggatgattcaccagaaagaaggtgcagtggtgtagtgaccggcatcagtgacttg
gatccctatcgatggccaaaatcaaaatggagatgcttaatggtgagatgggatgacgat
ataggaaatgatcatcaagaacgagtctctttgtgggagattgatccttctgtttctctc
ccacctttgagcattcagtcttctccaagattgaagaaactgcggacaagtctgcaggca
ttcccacctaaccactccattcctgctggaagttgtgggcttatggactttgaggagaca
gttaaatcctctaaggtcttgcaaggtcaagaaaatatgggtttcatatcaccccactat
ggatgtgatacattaaagagccctgtggattttgagatgcagccttcggcacatcaaaat
cttgcatcacatgtatcccagaaggctactattggcgagttcatgagagctcaccacacc
agttacacaggatttgcggaatctgacagatttccgaaagtcttgcaaggtcaagaaata
tgcccgttgagatctttgacaggaaaagcaaatttcaatctgggcaattgggagtccaat
cttggtagcacatctttcaacagttatcaggcacccaaaccaaatatgttcactctgggt
tctgaatcgcttctaaacatgtattttccttatggtgacattcacaaggttggccaagat
cccatgatatgctctaatactaccaactttcccagagagagtatcaaagcgaatccatat
tctattcagatgggagttacaagaaatgaagttggaaggccaaaaaaacctagtgagcat
cagccacaggaaagtacctctgctcttcctactttagtgacaaatataaaaagtccgaaa
gaggtcagcgctgatggaactgctaatggatgtaaacttttcggtttttccttatcgggg
gaaactcccaccctaagtcagagttctagtaagaggagttgtacaaaggttcacaagcaa
ggcagcttagtgggaagagccattgatctctcaaaactgaatggctatggtgacctgctg
agcgaactagagcggctatttagcatggaatgccttctacgagatcctaataaaggatgg
cggatcttgtatactgacagtgagaatgatgtcatggttgtaggggatgacccatggcat
gagttctgcaacgtggtttccaaaattcacatatacacccaggaagaagtggagaagatg
acaatcggaatgatcagtgatgatacccaaagttgtttggaacaagctccacctatgctg
gaagtgtcaaagtcctcatcagttgggcagccggattcttctccaacagcaattagggtc
tga
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