Rosa chinensis (China rose): 112167242
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Entry
112167242 CDS
T06020
Name
(RefSeq) peroxisome biogenesis protein 5
KO
K13342
peroxin-5
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112167242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112167242
Membrane trafficking [BR:
rcn04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112167242
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_16
TPR_17
TPR_8
TPR_CcmH_CycH
TPR_14
TPR_19
CFAP70_TPR_C
TPR_7
TPR_12
RMD1-3
TPR_9
TPR_20
CFAP70_mid_TPR
PPTA
NGF
CABIN1_N
DUF1543
Motif
Other DBs
NCBI-GeneID:
112167242
NCBI-ProteinID:
XP_024160000
LinkDB
All DBs
Position
5:complement(80190718..80198399)
Genome browser
AA seq
748 aa
AA seq
DB search
MAMRELVTGGAACAVPGSSSSSNPFGNLANALLNSSAKGQDLKELPSSLPTSSEAQFYPE
AHGPQLPGSEFDQPYVQPGTQSSDFLRNFNSVGGGNGLLESAWDEVQGSHPPPMHGPQVL
YDRGAAAQLQPTTLDGPPQRVLSSFLHSFVESSRGGIPFRPTQLPVLGLSAGDKQCIRDR
SSIMARHFFADKSEDFINGQVNALLCSLDIDGEANSKGPLPARFRELEGYWNESQAIQKP
GAHATDGWVTEFSQHRVDRGDPNVWAHSFEQQHGANGWASEFEQEQSQMMSADHMRGGNM
ASLAAMEQTRMLANTLAQNEDPKFQKSRFLQFVSKMSRGELIIDDNQVKQATSSAAGDWA
GEYQQQYNAGSNWANEYQHGEVEISRANQWANEFGSEQEQHGSVDDQWVNQFSKLHVDDW
AEEFGNQVGEGILGDSSADSWANAYDEFLNEQVASKQRLDSSRGVYVFSDMNPYVGHPNP
LKEGQDMFHKGLLSEAVLALEAEVLKNPDNAEGWRLLGIAHAENDDDQQAIAAMMRAQEA
DPTNLEVLLALGVSHTNELEQSAALKYLYGWLRNHPKYGVLARPELSDSLYYADVARTFN
EAAQMSPEDADVHIVLGVLYNLSREYDKAIESFRTALKLKPQDYSLWNKLGATQANSVQS
ADAILAYQQALDLKPNYVRAWANMGISYANQGMYEDSIRYYVRALTMNPKADNGWQYLRI
SLSCASRSDMLEACDSRNLDILLKEFPL
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcgtgagcttgtcaccggcggagcagcctgcgccgttccgggctcatcttcg
tcctccaatcccttcggcaatctcgccaacgctcttctcaactcctccgccaaaggccag
gacttaaaggagctgccttcttcgctgcccacgagctccgaggctcagttttacccggag
gcgcatggcccacagctgccggggtcggagtttgaccagccctacgtgcaacccggaacc
cagagctcagactttcttcgcaactttaactctgttggtggcggcaatggactgcttgaa
agtgcgtgggatgaggtacaaggctctcaccctcctcctatgcacggccctcaggttttg
tatgatcgcggcgccgctgctcagcttcaacccaccactttggatgggccaccgcagaga
gtgctgtcaagctttttgcactcgtttgttgaaagtagccgtggtgggatacctttccgt
cctactcaactcccagtgttgggattgtctgctggtgacaagcaatgcattcgtgatcgc
agcagcatcatggctcgacacttttttgcagataagagcgaggattttattaatggccag
gtaaacgcacttctatgctcgctagatattgacggtgaagccaacagtaaagggcctctc
cctgcaaggttccgggaactagagggttattggaacgaatcccaagctatccagaaacct
ggtgctcatgctacagatgggtgggtcacagaatttagccaacacagagtagatcgtggt
gatcctaatgtgtgggctcactcatttgagcaacaacatggtgccaatggttgggcatct
gaattcgagcaggaacagtctcagatgatgtctgcagatcatatgagaggtggaaatatg
gcaagcttagctgcaatggagcagactcgtatgcttgctaatacattagcacagaatgag
gacccaaaatttcagaagtcaaggtttctccagtttgtatcaaagatgagtcgtggtgaa
cttattattgatgataatcaagtcaagcaagccacgtcatctgctgctggggattgggca
ggagaatatcaacagcagtacaatgcgggttctaattgggctaacgaatatcagcatggg
gaggtggagatatctcgtgccaatcaatgggcaaatgagtttggttctgaacaagagcaa
catgggtcagttgatgatcagtgggtcaatcaattctctaagttgcatgttgatgactgg
gcagaagaatttggaaatcaggttggtgaaggaatattgggggacagttctgctgatagc
tgggctaacgcatatgatgagttcctaaatgagcaagtagcttccaagcagcgattggat
agttcaaggggcgtctatgtcttttctgatatgaacccttatgttggtcacccaaaccca
ctgaaagaaggccaggacatgttccataaaggtcttttgagtgaagcagtgcttgctttg
gaagctgaagtgctcaagaaccctgacaatgctgaaggttggaggctacttggaatagca
catgcagaaaatgatgatgatcaacaggctattgcagccatgatgcgtgcacaggaggct
gatccaactaatctagaagtgcttcttgcccttggagtgagccatactaatgaattggag
cagtcggctgctttgaaatatttatatggatggctacgtaatcacccaaagtatggagtg
cttgcgcgaccagagttgtcagattctttgtactatgctgatgttgcaagaactttcaat
gaagctgctcaaatgtcacctgaggatgctgacgtgcatatagttcttggtgtcctctac
aacttgtcaagagaatatgacaaagccattgagtccttcaggacagctttaaaactgaag
ccgcaggattactctctttggaacaagcttggagcaacacaagcaaacagtgttcagagt
gctgatgcaatattggcttatcaacaggcgctagatttgaagcccaactatgttcgtgca
tgggctaatatgggtatcagctatgccaaccagggcatgtatgaggattccatacgttac
tatgttcgagcacttaccatgaatccaaaggcagataacggttggcagtacttaagaatt
tctttaagttgtgcttctaggagtgacatgttggaagcttgtgattctcggaatctagac
attctcctgaaggagtttccattataa
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